Back to Multiple platform build/check report for BioC 3.14
ABCDEFGH[I]JKLMNOPQRSTUVWXYZ

This page was generated on 2021-10-22 12:04:30 -0400 (Fri, 22 Oct 2021).

BUILD BIN results for infercnv on riesling1

To the developers/maintainers of the infercnv package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/infercnv.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 927/2075HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
infercnv 1.9.1  (landing page)
Christophe Georgescu
Snapshot Date: 2021-10-21 14:50:08 -0400 (Thu, 21 Oct 2021)
git_url: https://git.bioconductor.org/packages/infercnv
git_branch: master
git_last_commit: 3fe4543
git_last_commit_date: 2021-08-16 16:18:55 -0400 (Mon, 16 Aug 2021)
nebbiolo2Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    NA  

Summary

Package: infercnv
Version: 1.9.1
Command: rm -rf infercnv.buildbin-libdir && mkdir infercnv.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=infercnv.buildbin-libdir infercnv_1.9.1.tar.gz
StartedAt: 2021-10-22 05:58:20 -0400 (Fri, 22 Oct 2021)
EndedAt: 2021-10-22 06:02:21 -0400 (Fri, 22 Oct 2021)
EllapsedTime: 240.4 seconds
RetCode: 0
Status:   OK  
PackageFile: infercnv_1.9.1.zip
PackageFileSize: 4.285 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf infercnv.buildbin-libdir && mkdir infercnv.buildbin-libdir && D:\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=infercnv.buildbin-libdir infercnv_1.9.1.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'infercnv' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'infercnv'
    finding HTML links ... done
    CreateInfercnvObject                    html  
    HMM_states                              html  
    MCMC_inferCNV-class                     html  
    add_to_seurat                           html  
    apply_median_filtering                  html  
    color.palette                           html  
    filterHighPNormals                      html  
    inferCNVBayesNet                        html  
    infercnv-class                          html  
    infercnv-package                        html  
    infercnv_annots_example                 html  
    infercnv_data_example                   html  
    infercnv_genes_example                  html  
    infercnv_object_example                 html  
    mcmc_obj                                html  
    plot_cnv                                html  
    plot_per_group                          html  
    run                                     html  
    sample_object                           html  
    validate_infercnv_obj                   html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'infercnv' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'infercnv' as infercnv_1.9.1.zip
* DONE (infercnv)