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This page was generated on 2022-01-21 11:07:47 -0500 (Fri, 21 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4163
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4058
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2021-12-21 r81400 ucrt) -- "Unsuffered Consequences" 4000
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4117
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for igvR on riesling1


To the developers/maintainers of the igvR package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/igvR.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 915/2075HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
igvR 1.15.2  (landing page)
Paul Shannon
Snapshot Date: 2022-01-20 13:55:17 -0500 (Thu, 20 Jan 2022)
git_url: https://git.bioconductor.org/packages/igvR
git_branch: master
git_last_commit: 20ba6be
git_last_commit_date: 2022-01-20 13:33:44 -0500 (Thu, 20 Jan 2022)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    ERROR  
riesling1Windows Server 2019 Standard / x64  OK    OK    ERROR    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    ERROR    OK  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    ERROR    OK  

Summary

Package: igvR
Version: 1.15.2
Command: rm -rf igvR.buildbin-libdir && mkdir igvR.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=igvR.buildbin-libdir igvR_1.15.2.tar.gz
StartedAt: 2022-01-20 20:59:18 -0500 (Thu, 20 Jan 2022)
EndedAt: 2022-01-20 21:00:26 -0500 (Thu, 20 Jan 2022)
EllapsedTime: 67.9 seconds
RetCode: 0
Status:   OK  
PackageFile: igvR_1.15.2.zip
PackageFileSize: 3.345 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf igvR.buildbin-libdir && mkdir igvR.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=igvR.buildbin-libdir igvR_1.15.2.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'igvR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
See system.file("LICENSE", package="MotifDb") for use restrictions.
** help
*** installing help indices
  converting help for package 'igvR'
    finding HTML links ... done
    BedpeInteractionsTrack-class            html  
    DataFrameAnnotationTrack-class          html  
    DataFrameQuantitativeTrack-class        html  
    GRangesAnnotationTrack-class            html  
    GRangesQuantitativeTrack-class          html  
    GWASTrack-class                         html  
    GenomicAlignmentTrack-class             html  
    QuantitativeTrack-class                 html  
    RemoteAlignmentTrack-class              html  
    Track-class                             html  
    UCSCBedAnnotationTrack-class            html  
    UCSCBedGraphQuantitativeTrack-class     html  
    VariantTrack-class                      html  
    displayTrack                            html  
    enableMotifLogoPopups                   html  
    getGenomicRegion                        html  
    getSupportedGenomes                     html  
    getTrackNames                           html  
    igvAnnotationTrack-class                html  
    igvR-class                              html  
    ping                                    html  
    removeTracksByName                      html  
    saveToSVG                               html  
    setCustomGenome                         html  
    setGenome                               html  
    setTrackClickFunction                   html  
    setTrackHeight                          html  
    showGenomicRegion                       html  
    showTrackLabels                         html  
    trackInfo                               html  
    trackSize-BedpeInteractionsTrack-method
                                            html  
    trackSize-DataFrameAnnotationTrack-method
                                            html  
    trackSize-DataFrameQuantitativeTrack-method
                                            html  
    trackSize-GRangesAnnotationTrack-method
                                            html  
    trackSize-GRangesQuantitativeTrack-method
                                            html  
    trackSize-GWASTrack-method              html  
    trackSize-GenomicAlignmentTrack-method
                                            html  
    trackSize-UCSCBedAnnotationTrack-method
                                            html  
    trackSize-UCSCBedGraphQuantitativeTrack-method
                                            html  
    trackSize-VariantTrack-method           html  
    trackSize                               html  
    zoomIn                                  html  
    zoomOut                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
See system.file("LICENSE", package="MotifDb") for use restrictions.
** testing if installed package can be loaded from final location
See system.file("LICENSE", package="MotifDb") for use restrictions.
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'igvR' as igvR_1.15.2.zip
* DONE (igvR)