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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL hapFabia
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* installing to library ‘/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library’
* installing *source* package ‘hapFabia’ ...
** using staged installation
** libs
using C compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
using SDK: ‘MacOSX11.3.sdk’
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c interfaceR.c -o interfaceR.o
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c split_sparse_matrixB.c -o split_sparse_matrixB.o
clang -arch x86_64 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/opt/R/x86_64/include    -fPIC  -falign-functions=64 -Wall -g -O2  -c vcftoFABIAB.c -o vcftoFABIAB.o
clang -arch x86_64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o hapFabia.so interfaceR.o split_sparse_matrixB.o vcftoFABIAB.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
clang -arch x86_64 -c ./commandLine/split_sparse_matrix.c -o ./commandLine/split_sparse_matrix.o -falign-functions=64 -Wall -g -O2 
clang -arch x86_64 -c split_sparse_matrixB.c -o ./commandLine/split_sparse_matrixB.o -falign-functions=64 -Wall -g -O2 
clang -arch x86_64 ./commandLine/split_sparse_matrix.o ./commandLine/split_sparse_matrixB.o -o ./commandLine/split_sparse_matrix
mv ./commandLine/split_sparse_matrix ../inst/commandLine/
clang -arch x86_64 -c ./commandLine/vcftoFABIA.c -o ./commandLine/vcftoFABIA.o -falign-functions=64 -Wall -g -O2 
clang -arch x86_64 -c vcftoFABIAB.c -o ./commandLine/vcftoFABIAB.o -falign-functions=64 -Wall -g -O2 
clang -arch x86_64 ./commandLine/vcftoFABIA.o ./commandLine/vcftoFABIAB.o -o ./commandLine/vcftoFABIA
mv ./commandLine/vcftoFABIA ../inst/commandLine/
installing to /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/00LOCK-hapFabia/00new/hapFabia/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (hapFabia)