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This page was generated on 2022-01-22 11:05:55 -0500 (Sat, 22 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4163
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4058
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2021-12-21 r81400 ucrt) -- "Unsuffered Consequences" 4000
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4117
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for gpart on nebbiolo1


To the developers/maintainers of the gpart package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/gpart.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 809/2075HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
gpart 1.13.0  (landing page)
Sun Ah Kim
Snapshot Date: 2022-01-21 13:55:18 -0500 (Fri, 21 Jan 2022)
git_url: https://git.bioconductor.org/packages/gpart
git_branch: master
git_last_commit: e388fd0
git_last_commit_date: 2021-10-26 12:46:57 -0500 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  ERROR    ERROR  skipped
riesling1Windows Server 2019 Standard / x64  ERROR    ERROR  skippedskipped
palomino3Windows Server 2022 Datacenter / x64  ERROR    ERROR  skippedskipped
merida1macOS 10.14.6 Mojave / x86_64  ERROR    ERROR  skippedskipped

Summary

Package: gpart
Version: 1.13.0
Command: /home/biocbuild/bbs-3.15-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data gpart
StartedAt: 2022-01-21 16:32:33 -0500 (Fri, 21 Jan 2022)
EndedAt: 2022-01-21 16:32:42 -0500 (Fri, 21 Jan 2022)
EllapsedTime: 9.3 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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###
### Running command:
###
###   /home/biocbuild/bbs-3.15-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data gpart
###
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* checking for file ‘gpart/DESCRIPTION’ ... OK
* preparing ‘gpart’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘gpart’ ...
** using staged installation
** libs
g++ -std=gnu++14 -I"/home/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include' -I/usr/local/include   -fpic  -g -O2  -Wall -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++14 -I"/home/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include' -I/usr/local/include   -fpic  -g -O2  -Wall -c gpart_cpp.cpp -o gpart_cpp.o
gpart_cpp.cpp: In function ‘uint32_t cubic_real_roots(double, double, double, Rcpp::NumericVector)’:
gpart_cpp.cpp:622:42: error: ‘PI’ was not declared in this scope
  622 |     solutions[1] = sq * cos(dxx + (2.0 * PI / 3.0)) - adiv3;
      |                                          ^~
make: *** [/home/biocbuild/bbs-3.15-bioc/R/etc/Makeconf:175: gpart_cpp.o] Error 1
ERROR: compilation failed for package ‘gpart’
* removing ‘/tmp/RtmpHm1r6n/Rinst3bec5b265ecab7/gpart’
      -----------------------------------
ERROR: package installation failed