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This page was generated on 2022-01-17 11:07:23 -0500 (Mon, 17 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4161
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4056
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2021-12-21 r81400 ucrt) -- "Unsuffered Consequences" 3998
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4115
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for geneRxCluster on riesling1


To the developers/maintainers of the geneRxCluster package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/geneRxCluster.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 730/2074HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
geneRxCluster 1.31.0  (landing page)
Charles Berry
Snapshot Date: 2022-01-16 13:55:18 -0500 (Sun, 16 Jan 2022)
git_url: https://git.bioconductor.org/packages/geneRxCluster
git_branch: master
git_last_commit: 34540c1
git_last_commit_date: 2021-10-26 12:11:22 -0500 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  NO, package depends on 'GenomicRanges' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: geneRxCluster
Version: 1.31.0
Command: rm -rf geneRxCluster.buildbin-libdir && mkdir geneRxCluster.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=geneRxCluster.buildbin-libdir geneRxCluster_1.31.0.tar.gz
StartedAt: 2022-01-16 21:00:23 -0500 (Sun, 16 Jan 2022)
EndedAt: 2022-01-16 21:01:50 -0500 (Sun, 16 Jan 2022)
EllapsedTime: 86.7 seconds
RetCode: 0
Status:   OK  
PackageFile: geneRxCluster_1.31.0.zip
PackageFileSize: 252.5 KiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf geneRxCluster.buildbin-libdir && mkdir geneRxCluster.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=geneRxCluster.buildbin-libdir geneRxCluster_1.31.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'geneRxCluster' ...
** using staged installation
** libs
"C:/rtools40/mingw64/bin/"gcc  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c cluster.c -o cluster.o
cluster.c: In function 'cutptClean_new_elt':
cluster.c:80:6: warning: suggest explicit braces to avoid ambiguous 'else' [-Wdangling-else]
   if (*pvj!=NOTAIL)
      ^
cluster.c: In function 'gRxC_cluster':
cluster.c:682:2: warning: 'cutptFunRes' may be used uninitialized in this function [-Wmaybe-uninitialized]
  SET_VECTOR_ELT(final,2,cutptFunRes);
  ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o geneRxCluster.dll tmp.def cluster.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LD:/biocbuild/bbs-3.15-bioc/R/bin/x64 -lR
installing to D:/biocbuild/bbs-3.15-bioc/meat/geneRxCluster.buildbin-libdir/00LOCK-geneRxCluster/00new/geneRxCluster/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'geneRxCluster'
    finding HTML links ... done
    critVal.alpha                           html  
    critVal.power                           html  
    critVal.target                          html  
    gRxCluster-object                       html  
    finding level-2 HTML links ... done

    gRxCluster                              html  
    gRxPlot                                 html  
    gRxPlotClumps                           html  
    gRxSummary                              html  
    geneRxCluster                           html  
    noprune                                 html  
    plot.cutpoints                          html  
    prune.loglik                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'geneRxCluster' as geneRxCluster_1.31.0.zip
* DONE (geneRxCluster)