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INSTALL report for geneClassifiers on riesling1

This page was generated on 2021-01-25 12:39:22 -0500 (Mon, 25 Jan 2021).

TO THE DEVELOPERS/MAINTAINERS OF THE geneClassifiers PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 675/1938HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
geneClassifiers 1.15.0
R Kuiper
Snapshot Date: 2021-01-24 14:40:26 -0500 (Sun, 24 Jan 2021)
URL: https://git.bioconductor.org/packages/geneClassifiers
Branch: master
Last Commit: 2b79514
Last Changed Date: 2020-10-27 11:21:25 -0500 (Tue, 27 Oct 2020)
malbec2 Linux (Ubuntu 20.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
riesling1 Windows Server 2019 Standard / x64 [ OK ] OK  OK  OK 
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: geneClassifiers
Version: 1.15.0
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/bioc/src/contrib/geneClassifiers_1.15.0.tar.gz && rm -rf geneClassifiers.buildbin-libdir && mkdir geneClassifiers.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=geneClassifiers.buildbin-libdir geneClassifiers_1.15.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL geneClassifiers_1.15.0.zip && rm geneClassifiers_1.15.0.tar.gz geneClassifiers_1.15.0.zip
StartedAt: 2021-01-24 16:27:42 -0500 (Sun, 24 Jan 2021)
EndedAt: 2021-01-24 16:28:46 -0500 (Sun, 24 Jan 2021)
EllapsedTime: 64.5 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/bioc/src/contrib/geneClassifiers_1.15.0.tar.gz && rm -rf geneClassifiers.buildbin-libdir && mkdir geneClassifiers.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=geneClassifiers.buildbin-libdir geneClassifiers_1.15.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL geneClassifiers_1.15.0.zip && rm geneClassifiers_1.15.0.tar.gz geneClassifiers_1.15.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 1281k  100 1281k    0     0  44.6M      0 --:--:-- --:--:-- --:--:-- 44.6M

install for i386

* installing *source* package 'geneClassifiers' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'geneClassifiers'
    finding HTML links ... done
    ClassifierParameters                    html  
REDIRECT:topic	 ClassifierParameters -> ClassifierParameters.html [ SUCCESS ]
    ClassifierResults                       html  
REDIRECT:topic	 ClassifierResults -> ClassifierResults.html [ SUCCESS ]
    FixedExpressionData                     html  
REDIRECT:topic	 FixedExpressionData -> FixedExpressionData.html [ SUCCESS ]
    bracket-methods                         html  
REDIRECT:topic	 [,FixedExpressionData,ANY,ANY-method -> bracket-methods.html [ SUCCESS ]
REDIRECT:topic	 [,FixedExpressionData,ANY,missing-method -> bracket-methods.html [ SUCCESS ]
REDIRECT:topic	 bracket,FixedExpressionData-method -> bracket-methods.html [ SUCCESS ]
REDIRECT:topic	 [,FixedExpressionData,missing,ANY-method -> bracket-methods.html [ SUCCESS ]
REDIRECT:topic	 [[,FixedExpressionData,ANY,missing-method -> bracket-methods.html [ SUCCESS ]
REDIRECT:topic	 [[,FixedExpressionData,missing,ANY-method -> bracket-methods.html [ SUCCESS ]
REDIRECT:topic	 [[,FixedExpressionData,ANY,ANY-method -> bracket-methods.html [ SUCCESS ]
REDIRECT:file	 bracket-methods.html -> bracket-methods.html [ SUCCESS ]
    dim-methods                             html  
REDIRECT:topic	 dim,FixedExpressionData-method -> dim-methods.html [ SUCCESS ]
REDIRECT:file	 dim-methods.html -> dim-methods.html [ SUCCESS ]
    exampleMAS5                             html  
REDIRECT:topic	 exampleMAS5 -> exampleMAS5.html [ SUCCESS ]
    finding level-2 HTML links ... done

    geneClassifiers-package                 html  
REDIRECT:topic	 geneClassifiers -> geneClassifiers-package.html [ SUCCESS ]
REDIRECT:topic	 geneClassifiers-package -> geneClassifiers-package.html [ SUCCESS ]
    getBatchCorrection-methods              html  
REDIRECT:topic	 getBatchCorrection -> getBatchCorrection-methods.html [ SUCCESS ]
REDIRECT:topic	 getBatchCorrection,ClassifierResults-method -> getBatchCorrection-methods.html [ SUCCESS ]
REDIRECT:file	 getBatchCorrection-methods.html -> getBatchCorrection-methods.html [ SUCCESS ]
    getCitations-methods                    html  
REDIRECT:topic	 getCitations -> getCitations-methods.html [ SUCCESS ]
REDIRECT:topic	 getCitations,ClassifierParameters-method -> getCitations-methods.html [ SUCCESS ]
REDIRECT:file	 getCitations-methods.html -> getCitations-methods.html [ SUCCESS ]
    getClassifications-methods              html  
REDIRECT:topic	 getClassifications -> getClassifications-methods.html [ SUCCESS ]
REDIRECT:topic	 getClassifications,ClassifierResults-method -> getClassifications-methods.html [ SUCCESS ]
REDIRECT:file	 getClassifications-methods.html -> getClassifications-methods.html [ SUCCESS ]
    getClassifier-methods                   html  
REDIRECT:topic	 getClassifier -> getClassifier-methods.html [ SUCCESS ]
REDIRECT:topic	 getClassifier,ClassifierResults-method -> getClassifier-methods.html [ SUCCESS ]
REDIRECT:topic	 getClassifier,character-method -> getClassifier-methods.html [ SUCCESS ]
REDIRECT:file	 getClassifier-methods.html -> getClassifier-methods.html [ SUCCESS ]
    getDecisionBoundaries-methods           html  
REDIRECT:topic	 getDecisionBoundaries -> getDecisionBoundaries-methods.html [ SUCCESS ]
REDIRECT:topic	 getDecisionBoundaries,ClassifierParameters-method -> getDecisionBoundaries-methods.html [ SUCCESS ]
REDIRECT:file	 getDecisionBoundaries-methods.html -> getDecisionBoundaries-methods.html [ SUCCESS ]
    getDescription-methods                  html  
REDIRECT:topic	 getDescription -> getDescription-methods.html [ SUCCESS ]
REDIRECT:topic	 getDescription,ClassifierParameters-method -> getDescription-methods.html [ SUCCESS ]
REDIRECT:file	 getDescription-methods.html -> getDescription-methods.html [ SUCCESS ]
    getEventChain-methods                   html  
REDIRECT:topic	 getEventChain -> getEventChain-methods.html [ SUCCESS ]
REDIRECT:topic	 getEventChain,ClassifierParameters-method -> getEventChain-methods.html [ SUCCESS ]
REDIRECT:file	 getEventChain-methods.html -> getEventChain-methods.html [ SUCCESS ]
    getIntercept-methods                    html  
REDIRECT:topic	 getIntercept -> getIntercept-methods.html [ SUCCESS ]
REDIRECT:topic	 getIntercept,ClassifierParameters-method -> getIntercept-methods.html [ SUCCESS ]
REDIRECT:file	 getIntercept-methods.html -> getIntercept-methods.html [ SUCCESS ]
    getMeans-methods                        html  
REDIRECT:topic	 getMeans -> getMeans-methods.html [ SUCCESS ]
REDIRECT:topic	 getMeans,ClassifierParameters-method -> getMeans-methods.html [ SUCCESS ]
REDIRECT:file	 getMeans-methods.html -> getMeans-methods.html [ SUCCESS ]
    getName-methods                         html  
REDIRECT:topic	 getName -> getName-methods.html [ SUCCESS ]
REDIRECT:topic	 getName,TransformationProcess-method -> getName-methods.html [ SUCCESS ]
REDIRECT:topic	 getName,ClassifierParameters-method -> getName-methods.html [ SUCCESS ]
REDIRECT:topic	 getName,ClassifierResults-method -> getName-methods.html [ SUCCESS ]
REDIRECT:file	 getName-methods.html -> getName-methods.html [ SUCCESS ]
    getNormalizationMethod-methods          html  
REDIRECT:topic	 getNormalizationMethod -> getNormalizationMethod-methods.html [ SUCCESS ]
REDIRECT:topic	 getNormalizationMethods -> getNormalizationMethod-methods.html [ SUCCESS ]
REDIRECT:topic	 getNormalizationMethod,FixedExpressionData-method -> getNormalizationMethod-methods.html [ SUCCESS ]
REDIRECT:topic	 getNormalizationMethod,ClassifierParameters-method -> getNormalizationMethod-methods.html [ SUCCESS ]
REDIRECT:file	 getNormalizationMethod-methods.html -> getNormalizationMethod-methods.html [ SUCCESS ]
    getProbeNames-methods                   html  
REDIRECT:topic	 getProbeNames -> getProbeNames-methods.html [ SUCCESS ]
REDIRECT:topic	 getProbeNames,ClassifierParameters-method -> getProbeNames-methods.html [ SUCCESS ]
REDIRECT:file	 getProbeNames-methods.html -> getProbeNames-methods.html [ SUCCESS ]
    getScores-methods                       html  
REDIRECT:topic	 getScores -> getScores-methods.html [ SUCCESS ]
REDIRECT:topic	 getScores,ClassifierResults-method -> getScores-methods.html [ SUCCESS ]
REDIRECT:file	 getScores-methods.html -> getScores-methods.html [ SUCCESS ]
    getSds-methods                          html  
REDIRECT:topic	 getSds -> getSds-methods.html [ SUCCESS ]
REDIRECT:topic	 getSds,ClassifierParameters-method -> getSds-methods.html [ SUCCESS ]
REDIRECT:file	 getSds-methods.html -> getSds-methods.html [ SUCCESS ]
    getTargetValue-methods                  html  
REDIRECT:topic	 getTargetValue -> getTargetValue-methods.html [ SUCCESS ]
REDIRECT:topic	 getTargetValue,FixedExpressionData-method -> getTargetValue-methods.html [ SUCCESS ]
REDIRECT:file	 getTargetValue-methods.html -> getTargetValue-methods.html [ SUCCESS ]
    getTrainingData-methods                 html  
REDIRECT:topic	 getTrainingData -> getTrainingData-methods.html [ SUCCESS ]
REDIRECT:topic	 getTrainingData,ClassifierParameters-method -> getTrainingData-methods.html [ SUCCESS ]
REDIRECT:file	 getTrainingData-methods.html -> getTrainingData-methods.html [ SUCCESS ]
    getWeightingType-methods                html  
REDIRECT:topic	 getWeightingType -> getWeightingType-methods.html [ SUCCESS ]
REDIRECT:topic	 getWeightingTypes -> getWeightingType-methods.html [ SUCCESS ]
REDIRECT:topic	 getWeightingType,ClassifierResults-method -> getWeightingType-methods.html [ SUCCESS ]
REDIRECT:file	 getWeightingType-methods.html -> getWeightingType-methods.html [ SUCCESS ]
    getWeights-methods                      html  
REDIRECT:topic	 getWeights -> getWeights-methods.html [ SUCCESS ]
REDIRECT:topic	 getWeights,ClassifierParameters-method -> getWeights-methods.html [ SUCCESS ]
REDIRECT:file	 getWeights-methods.html -> getWeights-methods.html [ SUCCESS ]
    runClassifier-methods                   html  
REDIRECT:topic	 runClassifier -> runClassifier-methods.html [ SUCCESS ]
REDIRECT:topic	 runClassifier,character,FixedExpressionData-method -> runClassifier-methods.html [ SUCCESS ]
REDIRECT:topic	 runClassifier,ClassifierParameters,FixedExpressionData-method -> runClassifier-methods.html [ SUCCESS ]
REDIRECT:topic	 runClassifier,ClassifierResults,FixedExpressionData-method -> runClassifier-methods.html [ SUCCESS ]
REDIRECT:file	 runClassifier-methods.html -> runClassifier-methods.html [ SUCCESS ]
    setNormalizationMethod-methods          html  
REDIRECT:topic	 setNormalizationMethod -> setNormalizationMethod-methods.html [ SUCCESS ]
REDIRECT:file	 setNormalizationMethod-methods.html -> setNormalizationMethod-methods.html [ SUCCESS ]
    showClassifierList-methods              html  
REDIRECT:topic	 showClassifierList -> showClassifierList-methods.html [ SUCCESS ]
REDIRECT:file	 showClassifierList-methods.html -> showClassifierList-methods.html [ SUCCESS ]
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'geneClassifiers' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'geneClassifiers' as geneClassifiers_1.15.0.zip
* DONE (geneClassifiers)
* installing to library 'D:/biocbuild/bbs-3.13-bioc/R/library'
package 'geneClassifiers' successfully unpacked and MD5 sums checked