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This page was generated on 2022-01-20 11:07:20 -0500 (Thu, 20 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4162
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4057
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2021-12-21 r81400 ucrt) -- "Unsuffered Consequences" 3999
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4116
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for gemini on riesling1


To the developers/maintainers of the gemini package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/gemini.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 711/2074HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
gemini 1.9.0  (landing page)
Sidharth Jain
Snapshot Date: 2022-01-19 13:55:26 -0500 (Wed, 19 Jan 2022)
git_url: https://git.bioconductor.org/packages/gemini
git_branch: master
git_last_commit: 1abf1f4
git_last_commit_date: 2021-10-26 12:52:55 -0500 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: gemini
Version: 1.9.0
Command: rm -rf gemini.buildbin-libdir && mkdir gemini.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=gemini.buildbin-libdir gemini_1.9.0.tar.gz
StartedAt: 2022-01-19 20:56:01 -0500 (Wed, 19 Jan 2022)
EndedAt: 2022-01-19 20:57:22 -0500 (Wed, 19 Jan 2022)
EllapsedTime: 80.7 seconds
RetCode: 0
Status:   OK  
PackageFile: gemini_1.9.0.zip
PackageFileSize: 4.173 MiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf gemini.buildbin-libdir && mkdir gemini.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=gemini.buildbin-libdir gemini_1.9.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'gemini' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'gemini'
    finding HTML links ... done
    Input                                   html  
    Model                                   html  
    Sgene2Pguides_hash                      html  
    Sguide2Pguides_hash                     html  
    compound                                html  
    counts                                  html  
    dot-median_normalize                    html  
    gemini_boxplot                          html  
    gemini_calculate_lfc                    html  
    gemini_create_input                     html  
    gemini_inference                        html  
    gemini_initialize                       html  
    gemini_parallelization                  html  
    gemini_plot_mae                         html  
    gemini_prepare_input                    html  
    gemini_score                            html  
    guide.annotation                        html  
    initialize_s                            html  
    initialize_tau                          html  
    initialize_x                            html  
    initialize_y                            html  
    pipe                                    html  
    sample.replicate.annotation             html  
    update_mae                              html  
    update_s_pb                             html  
    update_tau_pb                           html  
    update_x_pb                             html  
    update_y_pb                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'gemini' as gemini_1.9.0.zip
* DONE (gemini)