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This page was generated on 2023-09-23 11:36:14 -0400 (Sat, 23 Sep 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 22.04.2 LTS)x86_644.3.1 (2023-06-16) -- "Beagle Scouts" 4659
palomino4Windows Server 2022 Datacenterx644.3.1 (2023-06-16 ucrt) -- "Beagle Scouts" 4394
lconwaymacOS 12.6.5 Montereyx86_644.3.1 Patched (2023-06-17 r84564) -- "Beagle Scouts" 4408
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch644.3.1 (2023-06-16) -- "Beagle Scouts" 4397
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 691/2233HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
fcoex 1.15.1  (landing page)
Tiago Lubiana
Snapshot Date: 2023-09-22 14:05:07 -0400 (Fri, 22 Sep 2023)
git_url: https://git.bioconductor.org/packages/fcoex
git_branch: devel
git_last_commit: 6512b1b
git_last_commit_date: 2023-07-14 09:35:43 -0400 (Fri, 14 Jul 2023)
nebbiolo2Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    ERROR  skipped
palomino4Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
lconwaymacOS 12.6.5 Monterey / x86_64  OK    ERROR  skippedskipped
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    ERROR  skipped

INSTALL results for fcoex on nebbiolo2


To the developers/maintainers of the fcoex package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/fcoex.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: fcoex
Version: 1.15.1
Command: /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD INSTALL fcoex
StartedAt: 2023-09-22 15:46:10 -0400 (Fri, 22 Sep 2023)
EndedAt: 2023-09-22 15:47:28 -0400 (Fri, 22 Sep 2023)
EllapsedTime: 78.8 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD INSTALL fcoex
###
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* installing to library ‘/home/biocbuild/bbs-3.18-bioc/R/site-library’
* installing *source* package ‘fcoex’ ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB

Warning: replacing previous import ‘Matrix::head’ by ‘utils::head’ when loading ‘fcoex’
in method for ‘mod_ora’ with signature ‘"fcoex"’: no definition for class “fcoex”
** byte-compile and prepare package for lazy loading
Warning: replacing previous import ‘Matrix::head’ by ‘utils::head’ when loading ‘fcoex’
in method for ‘mod_ora’ with signature ‘"fcoex"’: no definition for class “fcoex”
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import ‘Matrix::head’ by ‘utils::head’ when loading ‘fcoex’
Warning: Package 'fcoex' is deprecated and will be removed from Bioconductor
  version 3.19
** testing if installed package can be loaded from final location
Warning: replacing previous import ‘Matrix::head’ by ‘utils::head’ when loading ‘fcoex’
Warning: Package 'fcoex' is deprecated and will be removed from Bioconductor
  version 3.19
** testing if installed package keeps a record of temporary installation path
* DONE (fcoex)