Back to Multiple platform build/check report for BioC 3.17
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This page was generated on 2022-11-26 11:05:25 -0500 (Sat, 26 Nov 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.5 LTS)x86_64R Under development (unstable) (2022-10-25 r83175) -- "Unsuffered Consequences" 4462
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-10-11 r83083 ucrt) -- "Unsuffered Consequences" 4201
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-11-13 r83342) -- "Unsuffered Consequences" 4231
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for exomeCopy on nebbiolo1


To the developers/maintainers of the exomeCopy package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/exomeCopy.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 635/2154HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
exomeCopy 1.45.0  (landing page)
Michael Love
Snapshot Date: 2022-11-25 14:00:12 -0500 (Fri, 25 Nov 2022)
git_url: https://git.bioconductor.org/packages/exomeCopy
git_branch: master
git_last_commit: 584c54b
git_last_commit_date: 2022-11-01 11:06:27 -0500 (Tue, 01 Nov 2022)
nebbiolo1Linux (Ubuntu 20.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  NO, package depends on 'GenomicRanges' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  NO, package depends on 'Rsamtools' which is not available

Summary

Package: exomeCopy
Version: 1.45.0
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data exomeCopy
StartedAt: 2022-11-25 16:26:07 -0500 (Fri, 25 Nov 2022)
EndedAt: 2022-11-25 16:26:40 -0500 (Fri, 25 Nov 2022)
EllapsedTime: 33.6 seconds
RetCode: 0
Status:   OK  
PackageFile: exomeCopy_1.45.0.tar.gz
PackageFileSize: 418.2 KiB

Command output

##############################################################################
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###
### Running command:
###
###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data exomeCopy
###
##############################################################################
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* checking for file ‘exomeCopy/DESCRIPTION’ ... OK
* preparing ‘exomeCopy’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... OK
* cleaning src
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* looking to see if a ‘data/datalist’ file should be added
  NB: this package now depends on R (>= 3.5.0)
  WARNING: Added dependency on R >= 3.5.0 because serialized objects in
  serialize/load version 3 cannot be read in older versions of R.
  File(s) containing such objects:
    ‘exomeCopy/data/exomecounts.rda’
* building ‘exomeCopy_1.45.0.tar.gz’