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This page was generated on 2022-01-20 11:07:07 -0500 (Thu, 20 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4162
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4057
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2021-12-21 r81400 ucrt) -- "Unsuffered Consequences" 3999
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4116
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for derfinder on riesling1


To the developers/maintainers of the derfinder package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/derfinder.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 492/2074HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
derfinder 1.29.0  (landing page)
Leonardo Collado-Torres
Snapshot Date: 2022-01-19 13:55:26 -0500 (Wed, 19 Jan 2022)
git_url: https://git.bioconductor.org/packages/derfinder
git_branch: master
git_last_commit: 5c1cbd4
git_last_commit_date: 2021-10-26 12:16:21 -0500 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  NO, package depends on 'BiocGenerics' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: derfinder
Version: 1.29.0
Command: rm -rf derfinder.buildbin-libdir && mkdir derfinder.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=derfinder.buildbin-libdir derfinder_1.29.0.tar.gz
StartedAt: 2022-01-19 20:51:18 -0500 (Wed, 19 Jan 2022)
EndedAt: 2022-01-19 20:52:17 -0500 (Wed, 19 Jan 2022)
EllapsedTime: 59.2 seconds
RetCode: 0
Status:   OK  
PackageFile: derfinder_1.29.0.zip
PackageFileSize: 1.376 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf derfinder.buildbin-libdir && mkdir derfinder.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=derfinder.buildbin-libdir derfinder_1.29.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'derfinder' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'derfinder'
    finding HTML links ... done
    analyzeChr                              html  
    annotateRegions                         html  
    calculatePvalues                        html  
    calculateStats                          html  
    coerceGR                                html  
    collapseFullCoverage                    html  
    coverageToExon                          html  
    createBw                                html  
    createBwSample                          html  
    define_cluster                          html  
    derfinder-deprecated                    html  
    derfinder-package                       html  
    extendedMapSeqlevels                    html  
    filterData                              html  
    findRegions                             html  
    fullCoverage                            html  
    genomeData                              html  
    genomeDataRaw                           html  
    genomeFstats                            html  
    genomeInfo                              html  
    genomeRegions                           html  
    genomicState                            html  
    getRegionCoverage                       html  
    getTotalMapped                          html  
    loadCoverage                            html  
    makeGenomicState                        html  
    makeModels                              html  
    mergeResults                            html  
    preprocessCoverage                      html  
    railMatrix                              html  
    rawFiles                                html  
    regionMatrix                            html  
    sampleDepth                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'derfinder' as derfinder_1.29.0.zip
* DONE (derfinder)