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This page was generated on 2022-01-27 11:06:59 -0500 (Thu, 27 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4167
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4062
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2021-12-21 r81400 ucrt) -- "Unsuffered Consequences" 4004
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4121
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for coMethDMR on riesling1


To the developers/maintainers of the coMethDMR package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/coMethDMR.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 375/2077HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
coMethDMR 0.99.12  (landing page)
Fernanda Veitzman
Snapshot Date: 2022-01-26 13:55:18 -0500 (Wed, 26 Jan 2022)
git_url: https://git.bioconductor.org/packages/coMethDMR
git_branch: master
git_last_commit: 5762fdd
git_last_commit_date: 2021-11-12 11:03:27 -0500 (Fri, 12 Nov 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    WARNINGS    NA  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  NO, package depends on 'bumphunter' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: coMethDMR
Version: 0.99.12
Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL coMethDMR
StartedAt: 2022-01-26 16:02:18 -0500 (Wed, 26 Jan 2022)
EndedAt: 2022-01-26 16:03:31 -0500 (Wed, 26 Jan 2022)
EllapsedTime: 73.5 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
###
###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL coMethDMR
###
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'coMethDMR' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Note: possible error in 'sesameDataCache("HM450")': unused argument ("HM450") 
Note: possible error in 'sesameDataCache("EPIC")': unused argument ("EPIC") 
** help
*** installing help indices
  converting help for package 'coMethDMR'
    finding HTML links ... done
    AnnotateResults                         html  
    CloseBySingleRegion                     html  
    CoMethAllRegions                        html  
    CoMethSingleRegion                      html  
    CpGsInfoAllRegions                      html  
    CpGsInfoOneRegion                       html  
    CreateOutputDF                          html  
    CreateParallelWorkers                   html  
    CreateRdrop                             html  
    FindComethylatedRegions                 html  
    GetCpGsInRegion                         html  
    GetResiduals                            html  
    MarkComethylatedCpGs                    html  
    NameRegion                              html  
    OrderCpGsByLocation                     html  
    RegionsToRanges                         html  
    SplitCpGDFbyRegion                      html  
    WriteCloseByAllRegions                  html  
    betaMatrix_ex1                          html  
    betaMatrix_ex2                          html  
    betaMatrix_ex3                          html  
    betaMatrix_ex4                          html  
    betasChr22_df                           html  
    coMethDMR_setup                         html  
    lmmTest                                 html  
    lmmTestAllRegions                       html  
    pheno_df                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
snapshotDate(): 2022-01-20
** testing if installed package can be loaded from final location
snapshotDate(): 2022-01-20
** testing if installed package keeps a record of temporary installation path
* DONE (coMethDMR)
Making 'packages.html' ... done