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This page was generated on 2022-01-17 11:06:57 -0500 (Mon, 17 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4161
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4056
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2021-12-21 r81400 ucrt) -- "Unsuffered Consequences" 3998
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4115
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for cellHTS2 on riesling1


To the developers/maintainers of the cellHTS2 package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/cellHTS2.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 263/2074HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
cellHTS2 2.59.0  (landing page)
Joseph Barry
Snapshot Date: 2022-01-16 13:55:18 -0500 (Sun, 16 Jan 2022)
git_url: https://git.bioconductor.org/packages/cellHTS2
git_branch: master
git_last_commit: 023536c
git_last_commit_date: 2021-10-26 11:51:17 -0500 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  NO, package depends on 'Biobase' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: cellHTS2
Version: 2.59.0
Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL cellHTS2
StartedAt: 2022-01-16 15:59:37 -0500 (Sun, 16 Jan 2022)
EndedAt: 2022-01-16 16:00:47 -0500 (Sun, 16 Jan 2022)
EllapsedTime: 70.2 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL cellHTS2
###
##############################################################################
##############################################################################


* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'cellHTS2' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'cellHTS2'
    finding HTML links ... done
    Bscore                                  html  
    Data                                    html  
    ROC-class                               html  
    ROC                                     html  
    annotate                                html  
    batch                                   html  
    bdgpbiomart                             html  
    buildCellHTS2                           html  
    cellHTS-class                           html  
    cellHTS2                                html  
    configurationAsScreenPlot               html  
    configure                               html  
    convertOldCellHTS                       html  
    convertWellCoordinates                  html  
    data-KcViab                             html  
    data-KcViabSmall                        html  
    data-dualCh                             html  
    data-oldKcViabSmall                     html  
    getDynamicRange                         html  
    getEnVisionRawData                      html  
    getMeasureRepAgreement                  html  
    getTopTable                             html  
    getZfactor                              html  
    gseaModule                              html  
    imageScreen                             html  
    intensityFiles                          html  
    normalizePlates                         html  
    oneRowPerId                             html  
    plate                                   html  
    plateEffects                            html  
    plotSpatialEffects                      html  
    readHTAnalystData                       html  
    readPlateList                           html  
    rsa                                     html  
    scoreReplicates                         html  
    scores2calls                            html  
    setSettings                             html  
    spatialNormalization                    html  
    state                                   html  
    summarizeChannels                       html  
    summarizeReplicates                     html  
    templateDescriptionFile                 html  
    updateCellHTS                           html  
    wellAnno                                html  
    write.tabdel                            html  
    writeReport                             html  
    writeTab                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (cellHTS2)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'rexposome' is missing or broken
 done