Back to Multiple platform build/check report for BioC 3.15
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This page was generated on 2022-01-26 11:07:15 -0500 (Wed, 26 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4164
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4059
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2021-12-21 r81400 ucrt) -- "Unsuffered Consequences" 4001
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4118
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for categoryCompare on riesling1


To the developers/maintainers of the categoryCompare package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/categoryCompare.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 248/2075HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
categoryCompare 1.39.0  (landing page)
Robert M. Flight
Snapshot Date: 2022-01-25 13:55:17 -0500 (Tue, 25 Jan 2022)
git_url: https://git.bioconductor.org/packages/categoryCompare
git_branch: master
git_last_commit: b76dc35
git_last_commit_date: 2021-10-26 12:03:05 -0500 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  NO, package depends on 'Biobase' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: categoryCompare
Version: 1.39.0
Command: rm -rf categoryCompare.buildbin-libdir && mkdir categoryCompare.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=categoryCompare.buildbin-libdir categoryCompare_1.39.0.tar.gz
StartedAt: 2022-01-25 20:48:37 -0500 (Tue, 25 Jan 2022)
EndedAt: 2022-01-25 20:49:56 -0500 (Tue, 25 Jan 2022)
EllapsedTime: 78.8 seconds
RetCode: 0
Status:   OK  
PackageFile: categoryCompare_1.39.0.zip
PackageFileSize: 2.664 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf categoryCompare.buildbin-libdir && mkdir categoryCompare.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=categoryCompare.buildbin-libdir categoryCompare_1.39.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'categoryCompare' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Note: ... may be used in an incorrect context 
** help
*** installing help indices
  converting help for package 'categoryCompare'
    finding HTML links ... done
    GENccEnrichResult-class                 html  
    finding level-2 HTML links ... done

    HyperGParamsCC-class                    html  
    HyperGResultCC-class                    html  
    breakEdges-methods                      html  
    categoryCompare-package                 html  
    ccCompare                               html  
    ccCompareCollection-class               html  
    ccCompareGeneric-methods                html  
    ccCompareResult-class                   html  
    ccData                                  html  
    ccEnrich                                html  
    ccEnrichCollection-class                html  
    ccEnrichResult-class                    html  
    ccGeneList-class                        html  
    ccOptions-class                         html  
    ccOutCyt-methods                        html  
    ccSigList-class                         html  
    cwReload-methods                        html  
    cytOutData-methods                      html  
    cytOutNodes-methods                     html  
    fdr                                     html  
    getGeneSymbol                           html  
    graphType-methods                       html  
    hyperGTestCC                            html  
    listNames                               html  
    mergeLists-methods                      html  
    mergedData-class                        html  
    minCount                                html  
    minNodes                                html  
    pvalueType                              html  
    resetColors-methods                     html  
    show-methods                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'categoryCompare' as categoryCompare_1.39.0.zip
* DONE (categoryCompare)