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This page was generated on 2022-01-18 11:06:53 -0500 (Tue, 18 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4161
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4056
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2021-12-21 r81400 ucrt) -- "Unsuffered Consequences" 3998
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4115
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for bumphunter on riesling1


To the developers/maintainers of the bumphunter package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/bumphunter.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 224/2074HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
bumphunter 1.37.1  (landing page)
Tamilselvi Guharaj
Snapshot Date: 2022-01-17 13:55:17 -0500 (Mon, 17 Jan 2022)
git_url: https://git.bioconductor.org/packages/bumphunter
git_branch: master
git_last_commit: 478db86
git_last_commit_date: 2021-11-20 23:19:33 -0500 (Sat, 20 Nov 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  NO, package depends on 'S4Vectors' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: bumphunter
Version: 1.37.1
Command: rm -rf bumphunter.buildbin-libdir && mkdir bumphunter.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=bumphunter.buildbin-libdir bumphunter_1.37.1.tar.gz
StartedAt: 2022-01-17 20:47:58 -0500 (Mon, 17 Jan 2022)
EndedAt: 2022-01-17 20:49:26 -0500 (Mon, 17 Jan 2022)
EllapsedTime: 87.9 seconds
RetCode: 0
Status:   OK  
PackageFile: bumphunter_1.37.1.zip
PackageFileSize: 4.487 MiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf bumphunter.buildbin-libdir && mkdir bumphunter.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=bumphunter.buildbin-libdir bumphunter_1.37.1.tar.gz
###
##############################################################################
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* installing *source* package 'bumphunter' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'bumphunter'
    finding HTML links ... done
    TT                                      html  
    annotateNearest                         html  
    annotateTranscripts                     html  
    bumphunter                              html  
    clusterMaker                            html  
    dummyData                               html  
    getSegments                             html  
    locfitByCluster                         html  
    loessByCluster                          html  
    matchGenes                              html  
    regionFinder                            html  
    runmedByCluster                         html  
    smoother                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'bumphunter' as bumphunter_1.37.1.zip
* DONE (bumphunter)