Back to Multiple platform build/check report for BioC 3.15
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This page was generated on 2022-01-15 11:06:57 -0500 (Sat, 15 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4160
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4055
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2021-12-21 r81400 ucrt) -- "Unsuffered Consequences" 3997
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4114
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for XCIR on nebbiolo1


To the developers/maintainers of the XCIR package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/XCIR.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 2060/2074HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
XCIR 1.9.0  (landing page)
Renan Sauteraud
Snapshot Date: 2022-01-14 13:55:18 -0500 (Fri, 14 Jan 2022)
git_url: https://git.bioconductor.org/packages/XCIR
git_branch: master
git_last_commit: 7afddf1
git_last_commit_date: 2021-10-26 12:52:24 -0500 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    ERROR  skipped
riesling1Windows Server 2019 Standard / x64  OK    ERROR  skippedskipped
palomino3Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
merida1macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped

Summary

Package: XCIR
Version: 1.9.0
Command: /home/biocbuild/bbs-3.15-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data XCIR
StartedAt: 2022-01-14 18:01:09 -0500 (Fri, 14 Jan 2022)
EndedAt: 2022-01-14 18:01:57 -0500 (Fri, 14 Jan 2022)
EllapsedTime: 48.2 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
###
###   /home/biocbuild/bbs-3.15-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data XCIR
###
##############################################################################
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* checking for file ‘XCIR/DESCRIPTION’ ... OK
* preparing ‘XCIR’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘xcir_intro.Rmd’ using knitr
Ensembl site unresponsive, trying asia mirror
Quitting from lines 74-76 (xcir_intro.Rmd) 
Error: processing vignette 'xcir_intro.Rmd' failed with diagnostics:
SSL certificate problem: unable to get local issuer certificate
--- failed re-building ‘xcir_intro.Rmd’

SUMMARY: processing the following file failed:
  ‘xcir_intro.Rmd’

Error: Vignette re-building failed.
Execution halted