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This page was generated on 2022-01-28 11:09:09 -0500 (Fri, 28 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4167
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4062
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2021-12-21 r81400 ucrt) -- "Unsuffered Consequences" 4004
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4121
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for VariantExperiment on riesling1


To the developers/maintainers of the VariantExperiment package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/VariantExperiment.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 2033/2077HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
VariantExperiment 1.9.0  (landing page)
Qian Liu
Snapshot Date: 2022-01-27 13:55:17 -0500 (Thu, 27 Jan 2022)
git_url: https://git.bioconductor.org/packages/VariantExperiment
git_branch: master
git_last_commit: c6e2a3d
git_last_commit_date: 2021-10-26 12:53:37 -0500 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    WARNINGS    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  NO, package depends on 'S4Vectors' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: VariantExperiment
Version: 1.9.0
Command: rm -rf VariantExperiment.buildbin-libdir && mkdir VariantExperiment.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=VariantExperiment.buildbin-libdir VariantExperiment_1.9.0.tar.gz
StartedAt: 2022-01-27 21:28:51 -0500 (Thu, 27 Jan 2022)
EndedAt: 2022-01-27 21:29:52 -0500 (Thu, 27 Jan 2022)
EllapsedTime: 61.7 seconds
RetCode: 0
Status:   OK  
PackageFile: VariantExperiment_1.9.0.zip
PackageFileSize: 409.8 KiB

Command output

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###
### Running command:
###
###   rm -rf VariantExperiment.buildbin-libdir && mkdir VariantExperiment.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=VariantExperiment.buildbin-libdir VariantExperiment_1.9.0.tar.gz
###
##############################################################################
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* installing *source* package 'VariantExperiment' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'VariantExperiment'
    finding HTML links ... done
    VariantExperiment-class                 html  
    VariantExperiment-package               html  
    loadVariantExperiment                   html  
    makeVariantExperimentFromGDS            html  
    makeVariantExperimentFromVCF            html  
    saveVariantExperiment                   html  
    showAvailable                           html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'VariantExperiment' as VariantExperiment_1.9.0.zip
* DONE (VariantExperiment)