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This page was generated on 2022-01-21 11:08:47 -0500 (Fri, 21 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4163
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4058
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2021-12-21 r81400 ucrt) -- "Unsuffered Consequences" 4000
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4117
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for TFEA.ChIP on riesling1


To the developers/maintainers of the TFEA.ChIP package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/TFEA.ChIP.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1939/2075HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TFEA.ChIP 1.15.1  (landing page)
Laura Puente SantamarĂ­a
Snapshot Date: 2022-01-20 13:55:17 -0500 (Thu, 20 Jan 2022)
git_url: https://git.bioconductor.org/packages/TFEA.ChIP
git_branch: master
git_last_commit: 8dfc758
git_last_commit_date: 2021-11-21 01:00:12 -0500 (Sun, 21 Nov 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  NO, package depends on 'GenomicRanges' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: TFEA.ChIP
Version: 1.15.1
Command: rm -rf TFEA.ChIP.buildbin-libdir && mkdir TFEA.ChIP.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=TFEA.ChIP.buildbin-libdir TFEA.ChIP_1.15.1.tar.gz
StartedAt: 2022-01-20 21:23:01 -0500 (Thu, 20 Jan 2022)
EndedAt: 2022-01-20 21:24:11 -0500 (Thu, 20 Jan 2022)
EllapsedTime: 70.1 seconds
RetCode: 0
Status:   OK  
PackageFile: TFEA.ChIP_1.15.1.zip
PackageFileSize: 3.905 MiB

Command output

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###
### Running command:
###
###   rm -rf TFEA.ChIP.buildbin-libdir && mkdir TFEA.ChIP.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=TFEA.ChIP.buildbin-libdir TFEA.ChIP_1.15.1.tar.gz
###
##############################################################################
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* installing *source* package 'TFEA.ChIP' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'TFEA.ChIP'
    finding HTML links ... done
    ARNT.metadata                           html  
    ARNT.peaks.bed                          html  
    DnaseHS_db                              html  
    Entrez.gene.IDs                         html  
    GR2tfbs_db                              html  
    GSEA.result                             html  
    GSEA_ESpermutations                     html  
    GSEA_EnrichmentScore                    html  
    GSEA_run                                html  
    GeneID2entrez                           html  
    Genes.Upreg                             html  
    Mat01                                   html  
    MetaData                                html  
    Select_genes                            html  
    contingency_matrix                      html  
    getCMstats                              html  
    get_LFC_bar                             html  
    get_chip_index                          html  
    gr.list                                 html  
    highlight_TF                            html  
    hypoxia                                 html  
    hypoxia_DESeq                           html  
    log2.FC                                 html  
    makeTFBSmatrix                          html  
    plot_CM                                 html  
    plot_ES                                 html  
    plot_RES                                html  
    preprocessInputData                     html  
    rankTFs                                 html  
    set_user_data                           html  
    tfbs.database                           html  
    txt2GR                                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'TFEA.ChIP' as TFEA.ChIP_1.15.1.zip
* DONE (TFEA.ChIP)