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This page was generated on 2022-08-15 11:05:41 -0400 (Mon, 15 Aug 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.2.1 (2022-06-23) -- "Funny-Looking Kid" 4378
palomino4Windows Server 2022 Datacenterx644.2.1 (2022-06-23 ucrt) -- "Funny-Looking Kid" 4161
lconwaymacOS 12.2.1 Montereyx86_644.2.1 Patched (2022-07-09 r82577) -- "Funny-Looking Kid" 4169
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for TCGAbiolinksGUI on nebbiolo2


To the developers/maintainers of the TCGAbiolinksGUI package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/TCGAbiolinksGUI.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1989/2140HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TCGAbiolinksGUI 1.23.1  (landing page)
Tiago C. Silva
Snapshot Date: 2022-08-14 14:00:05 -0400 (Sun, 14 Aug 2022)
git_url: https://git.bioconductor.org/packages/TCGAbiolinksGUI
git_branch: master
git_last_commit: 00cd41c
git_last_commit_date: 2022-05-10 10:18:05 -0400 (Tue, 10 May 2022)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  ERROR    ERROR  skipped
palomino4Windows Server 2022 Datacenter / x64  ERROR    ERROR  skippedskipped
lconwaymacOS 12.2.1 Monterey / x86_64  ERROR    ERROR  skippedskipped

Summary

Package: TCGAbiolinksGUI
Version: 1.23.1
Command: /home/biocbuild/bbs-3.16-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data TCGAbiolinksGUI
StartedAt: 2022-08-14 18:04:58 -0400 (Sun, 14 Aug 2022)
EndedAt: 2022-08-14 18:05:00 -0400 (Sun, 14 Aug 2022)
EllapsedTime: 1.3 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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###
### Running command:
###
###   /home/biocbuild/bbs-3.16-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data TCGAbiolinksGUI
###
##############################################################################
##############################################################################


* checking for file ‘TCGAbiolinksGUI/DESCRIPTION’ ... OK
* preparing ‘TCGAbiolinksGUI’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘TCGAbiolinksGUI’ ...
** using staged installation
** R
Error in parse(outFile) : 
  /tmp/RtmplIp64v/Rbuild1fdac833363448/TCGAbiolinksGUI/R/zzz.R:28:1: unexpected '}'
27: }
28: }
    ^
ERROR: unable to collate and parse R files for package ‘TCGAbiolinksGUI’
* removing ‘/tmp/RtmplIp64v/Rinst1fdac829af8212/TCGAbiolinksGUI’
      -----------------------------------
ERROR: package installation failed