Multiple platform build/check report for BioC 3.16 - INSTALL results for TCGAbiolinksGUI on lconway

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This page was generated on 2022-08-15 11:08:29 -0400 (Mon, 15 Aug 2022).

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 20.04.4 LTS)	x86_64	4.2.1 (2022-06-23) -- "Funny-Looking Kid"	4378
palomino4	Windows Server 2022 Datacenter	x64	4.2.1 (2022-06-23 ucrt) -- "Funny-Looking Kid"	4161
lconway	macOS 12.2.1 Monterey	x86_64	4.2.1 Patched (2022-07-09 r82577) -- "Funny-Looking Kid"	4169
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

INSTALL results for TCGAbiolinksGUI on lconway

To the developers/maintainers of the TCGAbiolinksGUI package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/TCGAbiolinksGUI.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

~~TCGAbiolinksGUI 1.23.1~~ (landing page)
Tiago C. Silva

Snapshot Date: 2022-08-14 14:00:05 -0400 (Sun, 14 Aug 2022)

git_url: https://git.bioconductor.org/packages/TCGAbiolinksGUI

git_branch: master

git_last_commit: 00cd41c

git_last_commit_date: 2022-05-10 10:18:05 -0400 (Tue, 10 May 2022)

nebbiolo2

Linux (Ubuntu 20.04.4 LTS) / x86_64

ERROR

skipped

palomino4

Windows Server 2022 Datacenter / x64

ERROR

skipped

lconway

macOS 12.2.1 Monterey / x86_64

ERROR

skipped

Summary

Package: TCGAbiolinksGUI

Version: 1.23.1

Command: /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL TCGAbiolinksGUI

StartedAt: 2022-08-14 15:43:14 -0400 (Sun, 14 Aug 2022)

EndedAt: 2022-08-14 15:43:15 -0400 (Sun, 14 Aug 2022)

EllapsedTime: 1.0 seconds

RetCode: 1

Status: ERROR

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL TCGAbiolinksGUI
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/4.2/Resources/library’
* installing *source* package ‘TCGAbiolinksGUI’ ...
** using staged installation
** R
Error in parse(outFile) : 
  /Users/biocbuild/bbs-3.16-bioc/meat/TCGAbiolinksGUI/R/zzz.R:28:1: unexpected '}'
27: }
28: }
    ^
ERROR: unable to collate and parse R files for package ‘TCGAbiolinksGUI’
* removing ‘/Library/Frameworks/R.framework/Versions/4.2/Resources/library/TCGAbiolinksGUI’