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INSTALL report for SynExtend on tokay2

This page was generated on 2021-01-20 12:34:55 -0500 (Wed, 20 Jan 2021).

TO THE DEVELOPERS/MAINTAINERS OF THE SynExtend PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1787/1932HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SynExtend 1.3.2
Nicholas Cooley
Snapshot Date: 2021-01-19 14:40:23 -0500 (Tue, 19 Jan 2021)
URL: https://git.bioconductor.org/packages/SynExtend
Branch: master
Last Commit: fe12ba7
Last Changed Date: 2020-12-16 14:16:05 -0500 (Wed, 16 Dec 2020)
malbec2 Linux (Ubuntu 20.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  NA 
riesling1 Windows Server 2019 Standard / x64  OK  OK  OK  OK 
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: SynExtend
Version: 1.3.2
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.13/bioc/src/contrib/SynExtend_1.3.2.tar.gz && rm -rf SynExtend.buildbin-libdir && mkdir SynExtend.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SynExtend.buildbin-libdir SynExtend_1.3.2.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL SynExtend_1.3.2.zip && rm SynExtend_1.3.2.tar.gz SynExtend_1.3.2.zip
StartedAt: 2021-01-19 17:46:59 -0500 (Tue, 19 Jan 2021)
EndedAt: 2021-01-19 17:47:56 -0500 (Tue, 19 Jan 2021)
EllapsedTime: 56.4 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.13/bioc/src/contrib/SynExtend_1.3.2.tar.gz && rm -rf SynExtend.buildbin-libdir && mkdir SynExtend.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SynExtend.buildbin-libdir SynExtend_1.3.2.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL SynExtend_1.3.2.zip && rm SynExtend_1.3.2.tar.gz SynExtend_1.3.2.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 1550k  100 1550k    0     0  23.9M      0 --:--:-- --:--:-- --:--:-- 27.5M

install for i386

* installing *source* package 'SynExtend' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'SynExtend'
    finding HTML links ... done
    ExactSelect                             html  
REDIRECT:topic	 ExactSelect -> ExactSelect.html [ SUCCESS ]
    GlobalSelect                            html  
REDIRECT:topic	 GlobalSelect -> GlobalSelect.html [ SUCCESS ]
    LinkedPairs-class                       html  
REDIRECT:topic	 LinkedPairs-class -> LinkedPairs-class.html [ SUCCESS ]
REDIRECT:topic	 [.LinkedPairs -> LinkedPairs-class.html [ SUCCESS ]
REDIRECT:topic	 print.LinkedPairs -> LinkedPairs-class.html [ SUCCESS ]
    LocalSelect                             html  
REDIRECT:topic	 LocalSelect -> LocalSelect.html [ SUCCESS ]
    NucleotideOverlap                       html  
REDIRECT:topic	 NucleotideOverlap -> NucleotideOverlap.html [ SUCCESS ]
    finding level-2 HTML links ... done

    PairSummaries                           html  
REDIRECT:topic	 PairSummaries -> PairSummaries.html [ SUCCESS ]
    gffToDataFrame                          html  
REDIRECT:topic	 gffToDataFrame -> gffToDataFrame.html [ SUCCESS ]
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'SynExtend' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SynExtend' as SynExtend_1.3.2.zip
* DONE (SynExtend)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'SynExtend' successfully unpacked and MD5 sums checked