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This page was generated on 2022-01-25 11:12:01 -0500 (Tue, 25 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4164
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4059
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2021-12-21 r81400 ucrt) -- "Unsuffered Consequences" 4001
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4118
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for SpatialExperiment on merida1


To the developers/maintainers of the SpatialExperiment package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SpatialExperiment.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1841/2075HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SpatialExperiment 1.5.2  (landing page)
Dario Righelli
Snapshot Date: 2022-01-24 13:55:18 -0500 (Mon, 24 Jan 2022)
git_url: https://git.bioconductor.org/packages/SpatialExperiment
git_branch: master
git_last_commit: 06b7977
git_last_commit_date: 2022-01-14 10:00:04 -0500 (Fri, 14 Jan 2022)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  NO, package depends on 'SingleCellExperiment' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: SpatialExperiment
Version: 1.5.2
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data SpatialExperiment
StartedAt: 2022-01-24 21:00:45 -0500 (Mon, 24 Jan 2022)
EndedAt: 2022-01-24 21:03:00 -0500 (Mon, 24 Jan 2022)
EllapsedTime: 134.9 seconds
RetCode: 0
Status:   OK  
PackageFile: SpatialExperiment_1.5.2.tar.gz
PackageFileSize: 19.35 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data SpatialExperiment
###
##############################################################################
##############################################################################


* checking for file ‘SpatialExperiment/DESCRIPTION’ ... OK
* preparing ‘SpatialExperiment’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
Omitted ‘LazyData’ from DESCRIPTION
  NB: this package now depends on R (>= 3.5.0)
  WARNING: Added dependency on R >= 3.5.0 because serialized objects in
  serialize/load version 3 cannot be read in older versions of R.
  File(s) containing such objects:
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-10_d5150eaeaf7397eff247e3692fd263c6.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-11_feca017739fbf5d9b380308420efc10f.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-12_b95ad436a4cb9ece1a5adea09045fe9c.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-13_509799562186b9c9530627cc4a999d52.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-14_f8a0ba5ddcfa6e8cf55000f1fa78fc70.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-15_4a2e4dbc1e68b8d0929bc61085e00b4c.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-16_b316c02a51d48f570e130ca04119acb0.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-17_fbc44dafa267f9e195a0feb64ac267c2.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-18_b3af99a0d05200cea3ee38e07ba92251.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-19_2a46a15388684971397be0dee89481ef.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-1_b940390f0eb200eec30ad39f5f849120.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-20_a53dea0873645b9a802f2542b6c0d0ac.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-21_d267e1ec128edbdb0908bae866ff06a9.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-22_e4f7e55b74ff45fb1be28a67b80a362b.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-23_f8fd1731fe1abd11786d14d18cbacda5.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-24_898c598cedd79f8006546a0321613420.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-25_6cf324f6607f692457d25aa31ef51a9f.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-26_49fc87c53e92c451004c969abe8d522a.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-27_c0fb4555c4d5f80a17bb19373b5626ce.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-28_cd15f01758c8b657482d71b6832b6920.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-29_be1dbf4fbb7bdd7ff058b064fdd3b177.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-2_965f26a6ac633179a91b1dafa7d5aec4.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-30_7d9211b57e21605945113afaedb77065.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-31_f6e3c739265032512b877d43a3f44aeb.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-32_bf14be0c93f282b3a4ffd081b4dcd87d.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-3_430c327dacf5ad3586c9a8117e2430ec.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-4_6037b0afa37b56b888a2005b741f10e6.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-5_bd95f2ed297aef4ee2effc0d424878ba.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-6_5eb2deb05de9c88bfc92f4c0210ed00d.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-7_2378b8667bf6c358d8777c745fd56901.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-8_86f3a021180f32c991ef3f64018493d4.RData’
    ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-9_3072cbeaea9500ead0afc3b0da0b3a80.RData’
* building ‘SpatialExperiment_1.5.2.tar.gz’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-10_d5150eaeaf7397eff247e3692fd263c6.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-11_feca017739fbf5d9b380308420efc10f.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-12_b95ad436a4cb9ece1a5adea09045fe9c.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-13_509799562186b9c9530627cc4a999d52.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-14_f8a0ba5ddcfa6e8cf55000f1fa78fc70.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-15_4a2e4dbc1e68b8d0929bc61085e00b4c.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-16_b316c02a51d48f570e130ca04119acb0.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-17_fbc44dafa267f9e195a0feb64ac267c2.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-18_b3af99a0d05200cea3ee38e07ba92251.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-19_2a46a15388684971397be0dee89481ef.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-1_b940390f0eb200eec30ad39f5f849120.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-20_a53dea0873645b9a802f2542b6c0d0ac.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-21_d267e1ec128edbdb0908bae866ff06a9.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-22_e4f7e55b74ff45fb1be28a67b80a362b.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-23_f8fd1731fe1abd11786d14d18cbacda5.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-24_898c598cedd79f8006546a0321613420.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-25_6cf324f6607f692457d25aa31ef51a9f.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-26_49fc87c53e92c451004c969abe8d522a.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-27_c0fb4555c4d5f80a17bb19373b5626ce.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-28_cd15f01758c8b657482d71b6832b6920.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-29_be1dbf4fbb7bdd7ff058b064fdd3b177.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-2_965f26a6ac633179a91b1dafa7d5aec4.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-30_7d9211b57e21605945113afaedb77065.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-31_f6e3c739265032512b877d43a3f44aeb.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-32_bf14be0c93f282b3a4ffd081b4dcd87d.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-3_430c327dacf5ad3586c9a8117e2430ec.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-4_6037b0afa37b56b888a2005b741f10e6.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-5_bd95f2ed297aef4ee2effc0d424878ba.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-6_5eb2deb05de9c88bfc92f4c0210ed00d.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-7_2378b8667bf6c358d8777c745fd56901.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-8_86f3a021180f32c991ef3f64018493d4.RData’
Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L,  :
  storing paths of more than 100 bytes is not portable:
  ‘SpatialExperiment/vignettes/SpatialExperiment_cache/html/unnamed-chunk-9_3072cbeaea9500ead0afc3b0da0b3a80.RData’