Back to Multiple platform build/check report for BioC 3.17:   simplified   long
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This page was generated on 2023-04-01 11:04:25 -0400 (Sat, 01 Apr 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.1 LTS)x86_64R Under development (unstable) (2023-03-16 r83996) -- "Unsuffered Consequences" 4551
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2023-03-15 r83984 ucrt) -- "Unsuffered Consequences" 4312
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2023-03-16 r83985) -- "Unsuffered Consequences" 4309
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

All results for package ShortRead


To the developers/maintainers of the ShortRead package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ShortRead.git to reflect on this report. See Troubleshooting Build Report for more information.

- Use the following Renviron settings to reproduce errors and warnings.

Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details.

raw results

Package 1881/2199HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ShortRead 1.57.1  (landing page)
Bioconductor Package Maintainer
Snapshot Date: 2023-03-31 14:00:12 -0400 (Fri, 31 Mar 2023)
git_url: https://git.bioconductor.org/packages/ShortRead
git_branch: devel
git_last_commit: 0b6a8e3
git_last_commit_date: 2022-11-16 07:57:29 -0400 (Wed, 16 Nov 2022)
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    NA  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Results for Bioconductor software packages that depend directly on package ShortRead

QUICK STATSOS / ArchINSTALLBUILDCHECKBUILD BIN
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64
0227
0326
03221
palomino3Windows Server 2022 Datacenter / x64
0126
0225
01321
102
merida1macOS 10.14.6 Mojave / x86_64
0226
0325
00421
0025
Package 1/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
amplican 1.21.0  (landing page)
Eivind Valen
git_last_commit: 5b04ab5
git_last_commit_date: 2022-11-01 11:16:19 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  ERROR    ERROR  skipped
palomino3Windows Server 2022 Datacenter / x64  ERROR    ERROR  skippedskipped
merida1macOS 10.14.6 Mojave / x86_64  ERROR    ERROR  skippedskipped
Package 2/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ArrayExpressHTS 1.49.1  (landing page)
Angela Goncalves , Andrew Tikhonov
git_last_commit: c9590d2
git_last_commit_date: 2022-12-01 14:06:42 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  ERROR    ERROR  skipped
palomino3Windows Server 2022 Datacenter / x64... NOT SUPPORTED ...
merida1macOS 10.14.6 Mojave / x86_64  ERROR    ERROR  skippedskipped
Package 3/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
basecallQC 1.23.0  (landing page)
Thomas Carroll
git_last_commit: 90046aa
git_last_commit_date: 2022-11-01 11:15:31 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 4/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BEAT 1.37.0  (landing page)
Kemal Akman
git_last_commit: d077bd7
git_last_commit_date: 2022-11-01 11:09:07 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 5/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CellBarcode 1.5.0  (landing page)
Wenjie Sun
git_last_commit: 3384f54
git_last_commit_date: 2022-11-09 10:22:12 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    TIMEOUT  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 6/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
chipseq 1.49.0  (landing page)
Bioconductor Package Maintainer
git_last_commit: 5a0e94e
git_last_commit_date: 2022-11-01 11:04:29 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    ERROR  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    NA  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
Package 7/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ChIPseqR 1.53.0  (landing page)
Peter Humburg
git_last_commit: be127a7
git_last_commit_date: 2022-11-01 11:04:43 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    NA  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 8/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ChIPsim 1.53.0  (landing page)
Peter Humburg
git_last_commit: 5030219
git_last_commit_date: 2022-11-01 11:04:35 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    NA  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 9/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CircSeqAlignTk 1.1.0  (landing page)
Jianqiang Sun
git_last_commit: 4fad321
git_last_commit_date: 2022-11-01 11:27:37 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    ERROR    NA  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 10/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
dada2 1.27.0  (landing page)
Benjamin Callahan
git_last_commit: 0e1cf87
git_last_commit_date: 2022-11-01 11:13:00 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    NA  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 11/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
easyRNASeq 2.35.0  (landing page)
Nicolas Delhomme
git_last_commit: 04012c4
git_last_commit_date: 2022-11-01 11:06:37 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    NA  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 12/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
EDASeq 2.33.0  (landing page)
Davide Risso
git_last_commit: 04a9ebb
git_last_commit_date: 2022-11-01 11:06:16 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    NA  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 13/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
esATAC 1.21.0  (landing page)
Zheng Wei
git_last_commit: dc1b794
git_last_commit_date: 2022-11-01 11:16:47 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    ERROR  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    NA  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  NO, package depends on 'ChIPseeker' which is not available
Package 14/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
FastqCleaner 1.17.0  (landing page)
Leandro Roser
git_last_commit: 952669f
git_last_commit_date: 2022-11-01 11:17:56 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    NA  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 15/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
girafe 1.51.0  (landing page)
J. Toedling
git_last_commit: 6dd5018
git_last_commit_date: 2022-11-01 11:04:57 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    NA  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 16/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
GOTHiC 1.35.0  (landing page)
Borbala Mifsud
git_last_commit: a97a62c
git_last_commit_date: 2022-11-01 11:20:09 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    NA  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 17/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
HTSeqGenie 4.29.1  (landing page)
Jens Reeder
git_last_commit: e9b146a
git_last_commit_date: 2023-01-20 12:47:05 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    ERROR  
palomino3Windows Server 2022 Datacenter / x64... NOT SUPPORTED ...
merida1macOS 10.14.6 Mojave / x86_64... NOT SUPPORTED ...
Package 18/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
icetea 1.17.0  (landing page)
Vivek Bhardwaj
git_last_commit: 52ec073
git_last_commit_date: 2022-11-01 11:18:00 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    ERROR  skipped
palomino3Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
merida1macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped
Package 19/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
IONiseR 2.23.0  (landing page)
Mike Smith
git_last_commit: 964eb85
git_last_commit_date: 2022-11-01 11:11:49 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    NA  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 20/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
nucleR 2.31.0  (landing page)
Alba Sala
git_last_commit: b03e676
git_last_commit_date: 2022-11-01 11:06:05 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    NA  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
Package 21/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
OTUbase 1.49.0  (landing page)
Daniel Beck
git_last_commit: fdc5a1c
git_last_commit_date: 2022-11-01 11:05:18 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    NA  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 22/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
QuasR 1.39.2  (landing page)
Michael Stadler
git_last_commit: cd52416
git_last_commit_date: 2023-01-27 11:17:31 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    NA  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
Package 23/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
R453Plus1Toolbox 1.49.0  (landing page)
Hans-Ulrich Klein
git_last_commit: 7b302c5
git_last_commit_date: 2022-11-01 11:05:23 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    NA  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 24/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Rqc 1.33.0  (landing page)
Welliton Souza
git_last_commit: 324a385
git_last_commit_date: 2022-11-01 11:10:42 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    NA  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 25/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RSVSim 1.39.0  (landing page)
Christoph Bartenhagen
git_last_commit: d86a39d
git_last_commit_date: 2022-11-01 11:07:44 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    NA  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 26/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
scruff 1.17.0  (landing page)
Zhe Wang
git_last_commit: ee6a5fa
git_last_commit_date: 2022-11-01 11:18:08 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    NA  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 27/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
segmentSeq 2.33.0  (landing page)
Thomas J. Hardcastle
git_last_commit: b7dc0c6
git_last_commit_date: 2022-11-01 11:04:54 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    OK  NO, package depends on 'baySeq' which is not available
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    NA  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  NO, package depends on 'baySeq' which is not available
Package 28/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
systemPipeR 2.5.0  (landing page)
Thomas Girke
git_last_commit: eded0f7
git_last_commit_date: 2022-11-01 11:10:17 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    NA  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
Package 29/29HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
UMI4Cats 1.9.1  (landing page)
Mireia Ramos-Rodriguez
git_last_commit: 45bc74f
git_last_commit_date: 2022-12-15 07:04:14 -0400
nebbiolo1Linux (Ubuntu 22.04.1 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    NA  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published