Rhonda Bacher
| Snapshot Date: 2021-01-13 14:40:33 -0500 (Wed, 13 Jan 2021) |
| URL: https://git.bioconductor.org/packages/SCnorm |
| Branch: master |
| Last Commit: a0c3ff9 |
| Last Changed Date: 2020-10-27 11:26:06 -0500 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-01-14 12:48:16 -0500 (Thu, 14 Jan 2021).
| TO THE DEVELOPERS/MAINTAINERS OF THE SCnorm PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1612/1931 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| SCnorm 1.13.0 Rhonda Bacher
| malbec2 | Linux (Ubuntu 20.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | NA | |||||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | OK | OK | OK | |||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: SCnorm |
| Version: 1.13.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.13/bioc/src/contrib/SCnorm_1.13.0.tar.gz && rm -rf SCnorm.buildbin-libdir && mkdir SCnorm.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SCnorm.buildbin-libdir SCnorm_1.13.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL SCnorm_1.13.0.zip && rm SCnorm_1.13.0.tar.gz SCnorm_1.13.0.zip |
| StartedAt: 2021-01-13 18:40:16 -0500 (Wed, 13 Jan 2021) |
| EndedAt: 2021-01-13 18:41:08 -0500 (Wed, 13 Jan 2021) |
| EllapsedTime: 51.3 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.13/bioc/src/contrib/SCnorm_1.13.0.tar.gz && rm -rf SCnorm.buildbin-libdir && mkdir SCnorm.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SCnorm.buildbin-libdir SCnorm_1.13.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL SCnorm_1.13.0.zip && rm SCnorm_1.13.0.tar.gz SCnorm_1.13.0.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 2811k 100 2811k 0 0 30.0M 0 --:--:-- --:--:-- --:--:-- 32.6M
install for i386
* installing *source* package 'SCnorm' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'SCnorm'
finding HTML links ... done
ExampleSimSCData html
REDIRECT:topic ExampleSimSCData -> ExampleSimSCData.html [ SUCCESS ]
GetTD html
REDIRECT:topic GetTD -> GetTD.html [ SUCCESS ]
SCnorm html
REDIRECT:topic SCnorm -> SCnorm.html [ SUCCESS ]
SCnormFit html
REDIRECT:topic SCnormFit -> SCnormFit.html [ SUCCESS ]
correctWithin html
REDIRECT:topic correctWithin -> correctWithin.html [ SUCCESS ]
evaluateK html
REDIRECT:topic evaluateK -> evaluateK.html [ SUCCESS ]
generateEvalPlot html
REDIRECT:topic generateEvalPlot -> generateEvalPlot.html [ SUCCESS ]
getCounts html
REDIRECT:topic getCounts -> getCounts.html [ SUCCESS ]
getDens html
REDIRECT:topic getDens -> getDens.html [ SUCCESS ]
getSlopes html
REDIRECT:topic getSlopes -> getSlopes.html [ SUCCESS ]
normWrapper html
REDIRECT:topic normWrapper -> normWrapper.html [ SUCCESS ]
plotCountDepth html
REDIRECT:topic plotCountDepth -> plotCountDepth.html [ SUCCESS ]
plotWithinFactor html
REDIRECT:topic plotWithinFactor -> plotWithinFactor.html [ SUCCESS ]
quickReg html
REDIRECT:topic quickReg -> quickReg.html [ SUCCESS ]
redoBox html
REDIRECT:topic redoBox -> redoBox.html [ SUCCESS ]
results html
REDIRECT:topic results -> results.html [ SUCCESS ]
scaleNormMultCont html
REDIRECT:topic scaleNormMultCont -> scaleNormMultCont.html [ SUCCESS ]
splitGroups html
REDIRECT:topic splitGroups -> splitGroups.html [ SUCCESS ]
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'SCnorm' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SCnorm' as SCnorm_1.13.0.zip
* DONE (SCnorm)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'SCnorm' successfully unpacked and MD5 sums checked