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### Running command:
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###   chmod a+r RiboProfiling -R && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data RiboProfiling
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* checking for file 'RiboProfiling/DESCRIPTION' ... OK
* preparing 'RiboProfiling':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'RiboProfiling.Rnw' using knitr
texify: major issue: User/administrator updates are out-of-sync.
Warning in system(paste(shQuote(texi2dvi), if (quiet) "--quiet" else "",  :
  running command '"C:\PROGRA~1\MiKTeX\miktex\bin\x64\texify.exe" --quiet --pdf "RiboProfiling.tex" --max-iterations=20 -I "F:/biocbuild/bbs-3.20-bioc/R/share/texmf/tex/latex" -I "F:/biocbuild/bbs-3.20-bioc/R/share/texmf/bibtex/bst"' had status 1
Error: processing vignette 'RiboProfiling.Rnw' failed with diagnostics:
running 'texi2dvi' on 'RiboProfiling.tex' failed

LaTeX errors:
gnettes/RiboProfiling.tex:109: Package xcolor Error: Undefined color `fgcolor'.


See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.
gnettes/RiboProfiling.tex:190: Package xcolor Error: Undefined color `fgcolor'.


See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.
gnettes/RiboProfiling.tex:201: Package xcolor Error: Undefined color `fgcolor'.


See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.
figure/CovAroundTSS_quick.tex:2: Package xcolor Error: Undefined color `fgcolor
'.

See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.
gnettes/RiboProfiling.tex:234: Package xcolor Error: Undefined color `fgcolor'.


See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.
gnettes/RiboProfiling.tex:261: Package xcolor Error: Undefined color `fgcolor'.


See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.
gnettes/RiboProfiling.tex:294: Package xcolor Error: Undefined color `fgcolor'.


See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.
gnettes/RiboProfiling.tex:338: Package xcolor Error: Undefined color `fgcolor'.


See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.
gnettes/RiboProfiling.tex:355: Package xcolor Error: Undefined color `fgcolor'.


See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.
gnettes/RiboProfiling.tex:372: Package xcolor Error: Undefined color `fgcolor'.


See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.
gnettes/RiboProfiling.tex:381: Package xcolor Error: Undefined color `fgcolor'.


See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.
gnettes/RiboProfiling.tex:413: Package xcolor Error: Undefined color `fgcolor'.


See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.
gnettes/RiboProfiling.tex:471: Package xcolor Error: Undefined color `fgcolor'.


See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.

--- failed re-building 'RiboProfiling.Rnw'

SUMMARY: processing the following file failed:
  'RiboProfiling.Rnw'

Error: Vignette re-building failed.
Execution halted