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This page was generated on 2023-09-23 11:36:44 -0400 (Sat, 23 Sep 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 22.04.2 LTS)x86_644.3.1 (2023-06-16) -- "Beagle Scouts" 4659
palomino4Windows Server 2022 Datacenterx644.3.1 (2023-06-16 ucrt) -- "Beagle Scouts" 4394
lconwaymacOS 12.6.5 Montereyx86_644.3.1 Patched (2023-06-17 r84564) -- "Beagle Scouts" 4408
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch644.3.1 (2023-06-16) -- "Beagle Scouts" 4397
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1692/2233HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ReportingTools 2.41.1  (landing page)
Jason A. Hackney , Gabriel Becker
Snapshot Date: 2023-09-22 14:05:07 -0400 (Fri, 22 Sep 2023)
git_url: https://git.bioconductor.org/packages/ReportingTools
git_branch: devel
git_last_commit: fe3c000
git_last_commit_date: 2023-09-05 11:54:48 -0400 (Tue, 05 Sep 2023)
nebbiolo2Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    ERROR  skipped
palomino4Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
lconwaymacOS 12.6.5 Monterey / x86_64  OK    ERROR  skippedskipped
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    ERROR  skipped

BUILD results for ReportingTools on nebbiolo2


To the developers/maintainers of the ReportingTools package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ReportingTools.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: ReportingTools
Version: 2.41.1
Command: /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data ReportingTools
StartedAt: 2023-09-22 18:12:11 -0400 (Fri, 22 Sep 2023)
EndedAt: 2023-09-22 18:13:38 -0400 (Fri, 22 Sep 2023)
EllapsedTime: 87.2 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data ReportingTools
###
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* checking for file ‘ReportingTools/DESCRIPTION’ ... OK
* preparing ‘ReportingTools’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘basicReportingTools.Rnw’ using Sweave
--- finished re-building ‘basicReportingTools.Rnw’

--- re-building ‘microarrayAnalysis.Rnw’ using Sweave
--- finished re-building ‘microarrayAnalysis.Rnw’

--- re-building ‘rnaseqAnalysis.Rnw’ using Sweave
--- finished re-building ‘rnaseqAnalysis.Rnw’

--- re-building ‘shiny.Rnw’ using Sweave
--- finished re-building ‘shiny.Rnw’

--- re-building ‘knitr.Rmd’ using knitr
Warning in file(con, "r") :
  cannot open file 'jslib/jquery-1.8.0.min.js': No such file or directory
Error: processing vignette 'knitr.Rmd' failed with diagnostics:
cannot open the connection
--- failed re-building ‘knitr.Rmd’

SUMMARY: processing the following file failed:
  ‘knitr.Rmd’

Error: Vignette re-building failed.
Execution halted