| Back to Multiple platform build/check report for BioC 3.18: simplified long |
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This page was generated on 2023-09-23 11:39:19 -0400 (Sat, 23 Sep 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 22.04.2 LTS) | x86_64 | 4.3.1 (2023-06-16) -- "Beagle Scouts" | 4659 |
| palomino4 | Windows Server 2022 Datacenter | x64 | 4.3.1 (2023-06-16 ucrt) -- "Beagle Scouts" | 4394 |
| lconway | macOS 12.6.5 Monterey | x86_64 | 4.3.1 Patched (2023-06-17 r84564) -- "Beagle Scouts" | 4408 |
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | 4.3.1 (2023-06-16) -- "Beagle Scouts" | 4397 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1692/2233 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Jason A. Hackney
| nebbiolo2 | Linux (Ubuntu 22.04.2 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| palomino4 | Windows Server 2022 Datacenter / x64 | OK | ERROR | skipped | skipped | |||||||||
| lconway | macOS 12.6.5 Monterey / x86_64 | OK | ERROR | skipped | skipped | |||||||||
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | ERROR | skipped | ||||||||||
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To the developers/maintainers of the ReportingTools package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ReportingTools.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: ReportingTools |
| Version: 2.41.1 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data ReportingTools |
| StartedAt: 2023-09-22 18:03:04 -0400 (Fri, 22 Sep 2023) |
| EndedAt: 2023-09-22 18:05:01 -0400 (Fri, 22 Sep 2023) |
| EllapsedTime: 117.4 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data ReportingTools ### ############################################################################## ############################################################################## * checking for file ‘ReportingTools/DESCRIPTION’ ... OK * preparing ‘ReportingTools’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘basicReportingTools.Rnw’ using Sweave --- finished re-building ‘basicReportingTools.Rnw’ --- re-building ‘microarrayAnalysis.Rnw’ using Sweave --- finished re-building ‘microarrayAnalysis.Rnw’ --- re-building ‘rnaseqAnalysis.Rnw’ using Sweave --- finished re-building ‘rnaseqAnalysis.Rnw’ --- re-building ‘shiny.Rnw’ using Sweave --- finished re-building ‘shiny.Rnw’ --- re-building ‘knitr.Rmd’ using knitr Warning in file(con, "r") : cannot open file 'jslib/jquery-1.8.0.min.js': No such file or directory Error: processing vignette 'knitr.Rmd' failed with diagnostics: cannot open the connection --- failed re-building ‘knitr.Rmd’ SUMMARY: processing the following file failed: ‘knitr.Rmd’ Error: Vignette re-building failed. Execution halted