############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data RegEnrich ### ############################################################################## ############################################################################## * checking for file ‘RegEnrich/DESCRIPTION’ ... OK * preparing ‘RegEnrich’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘RegEnrich.Rmd’ using rmarkdown trying URL 'https://www.ncbi.nlm.nih.gov/geo/download/?acc=GSE130567&format=file' Content type 'application/x-tar' length 7946240 bytes (7.6 MB) ================================================== downloaded 7.6 MB Quitting from lines 715-739 [case2RegEnrich] (RegEnrich.Rmd) Error: processing vignette 'RegEnrich.Rmd' failed with diagnostics: error in evaluating the argument 'object' in selecting a method for function 'regenrich_rankScore': error in evaluating the argument 'object' in selecting a method for function 'regenrich_enrich': error in evaluating the argument 'object' in selecting a method for function 'regenrich_network': 'arg' must be of length 1 --- failed re-building ‘RegEnrich.Rmd’ SUMMARY: processing the following file failed: ‘RegEnrich.Rmd’ Error: Vignette re-building failed. Execution halted