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This page was generated on 2024-03-04 11:39:47 -0500 (Mon, 04 Mar 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_64R Under development (unstable) (2024-01-16 r85808) -- "Unsuffered Consequences" 4676
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2024-01-14 r85805 ucrt) -- "Unsuffered Consequences" 4414
merida1macOS 12.7.1 Montereyx86_64R Under development (unstable) (2024-01-16 r85808) -- "Unsuffered Consequences" 4441
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch64R Under development (unstable) (2024-01-16 r85812) -- "Unsuffered Consequences" 4417
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1694/2251HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RegEnrich 1.13.1  (landing page)
Weiyang Tao
Snapshot Date: 2024-03-01 14:00:22 -0500 (Fri, 01 Mar 2024)
git_url: https://git.bioconductor.org/packages/RegEnrich
git_branch: devel
git_last_commit: d0e270d
git_last_commit_date: 2023-11-15 00:49:20 -0500 (Wed, 15 Nov 2023)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    ERROR  skipped
palomino3Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
merida1macOS 12.7.1 Monterey / x86_64  OK    ERROR  skippedskipped
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    ERROR  skipped

BUILD results for RegEnrich on merida1


To the developers/maintainers of the RegEnrich package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/RegEnrich.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: RegEnrich
Version: 1.13.1
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data RegEnrich
StartedAt: 2024-03-01 21:57:22 -0500 (Fri, 01 Mar 2024)
EndedAt: 2024-03-01 22:02:53 -0500 (Fri, 01 Mar 2024)
EllapsedTime: 331.3 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data RegEnrich
###
##############################################################################
##############################################################################


* checking for file ‘RegEnrich/DESCRIPTION’ ... OK
* preparing ‘RegEnrich’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘RegEnrich.Rmd’ using rmarkdown
trying URL 'https://www.ncbi.nlm.nih.gov/geo/download/?acc=GSE130567&format=file'
Content type 'application/x-tar' length 7946240 bytes (7.6 MB)
==================================================
downloaded 7.6 MB


Quitting from lines 715-739 [case2RegEnrich] (RegEnrich.Rmd)
Error: processing vignette 'RegEnrich.Rmd' failed with diagnostics:
error in evaluating the argument 'object' in selecting a method for function 'regenrich_rankScore': error in evaluating the argument 'object' in selecting a method for function 'regenrich_enrich': error in evaluating the argument 'object' in selecting a method for function 'regenrich_network': 'arg' must be of length 1
--- failed re-building ‘RegEnrich.Rmd’

SUMMARY: processing the following file failed:
  ‘RegEnrich.Rmd’

Error: Vignette re-building failed.
Execution halted