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This page was generated on 2021-11-30 13:55:07 -0500 (Tue, 30 Nov 2021).

INSTALL results for RadioGx on riesling1

To the developers/maintainers of the RadioGx package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/RadioGx.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1507/2068HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RadioGx 1.5.0  (landing page)
Benjamin Haibe-Kains
Snapshot Date: 2021-11-29 14:50:17 -0500 (Mon, 29 Nov 2021)
git_url: https://git.bioconductor.org/packages/RadioGx
git_branch: master
git_last_commit: a981039
git_last_commit_date: 2021-10-26 13:00:29 -0500 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
merida1macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped

Summary

Package: RadioGx
Version: 1.5.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.15/bioc/src/contrib/RadioGx_1.5.0.tar.gz && rm -rf RadioGx.buildbin-libdir && mkdir RadioGx.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RadioGx.buildbin-libdir RadioGx_1.5.0.tar.gz && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL RadioGx_1.5.0.zip && rm RadioGx_1.5.0.tar.gz RadioGx_1.5.0.zip
StartedAt: 2021-11-29 18:45:38 -0500 (Mon, 29 Nov 2021)
EndedAt: 2021-11-29 18:48:37 -0500 (Mon, 29 Nov 2021)
EllapsedTime: 179.1 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.15/bioc/src/contrib/RadioGx_1.5.0.tar.gz && rm -rf RadioGx.buildbin-libdir && mkdir RadioGx.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RadioGx.buildbin-libdir RadioGx_1.5.0.tar.gz && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL RadioGx_1.5.0.zip && rm RadioGx_1.5.0.tar.gz RadioGx_1.5.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 2232k  100 2232k    0     0  3929k      0 --:--:-- --:--:-- --:--:-- 3929k
only one architecture so ignoring '--merge-multiarch'
* installing *source* package 'RadioGx' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'RadioGx'
    finding HTML links ... done
    RadioSet-class                          html  
    RadioSet                                html  
    RadioSig                                html  
    availableRSets                          html  
    checkRSetStructure                      html  
    clevelandSmall                          html  
    computeAUC                              html  
    computeD10                              html  
    computeSF2                              html  
    dim-RadioSet-method                     html  
    doseResponseCurve                       html  
    downloadRSet                            html  
    linearQuadraticModel                    html  
    mDataNames-RadioSet-method              html  
    plotCurve                               html  
    radSensitivitySig                       html  
    radiationInfo-set                       html  
    radiationInfo                           html  
    radiationTypes-set                      html  
    radiationTypes                          html  
    show-RadioSet-method                    html  
    show-RadioSig-method                    html  
    showSigAnnot-RadioSig-method            html  
    sub-RadioSet-ANY-ANY-ANY-method         html  
    subsetTo-RadioSet-method                html  
    summarizeMolecularProfiles-RadioSet-method
                                            html  
    summarizeSensitivityProfiles-RadioSet-method
                                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'RadioGx' as RadioGx_1.5.0.zip
* DONE (RadioGx)
* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
package 'RadioGx' successfully unpacked and MD5 sums checked