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This page was generated on 2022-01-28 11:08:44 -0500 (Fri, 28 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4167
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4062
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2021-12-21 r81400 ucrt) -- "Unsuffered Consequences" 4004
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4121
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for RNAinteract on riesling1


To the developers/maintainers of the RNAinteract package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/RNAinteract.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1625/2077HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RNAinteract 1.43.0  (landing page)
Mike Smith
Snapshot Date: 2022-01-27 13:55:17 -0500 (Thu, 27 Jan 2022)
git_url: https://git.bioconductor.org/packages/RNAinteract
git_branch: master
git_last_commit: 5cddc4e
git_last_commit_date: 2021-10-26 11:58:13 -0500 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  NO, package depends on 'cellHTS2' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: RNAinteract
Version: 1.43.0
Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL RNAinteract
StartedAt: 2022-01-27 15:55:49 -0500 (Thu, 27 Jan 2022)
EndedAt: 2022-01-27 15:56:55 -0500 (Thu, 27 Jan 2022)
EllapsedTime: 66.0 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
###
###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL RNAinteract
###
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* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'RNAinteract' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'RNAinteract'
    finding HTML links ... done
    RNAinteract-class                       html  
    RNAinteract-package                     html  
    bindsamples                             html  
    computePI                               html  
    computePValues                          html  
    finding level-2 HTML links ... done

    createCellHTSFromFiles                  html  
    createRNAinteract                       html  
    createRNAinteractFromFiles              html  
    embedPCA                                html  
    estimateMainEffect                      html  
    getData                                 html  
    getMain                                 html  
    getReplicateData                        html  
    getSampleNames                          html  
    getScale                                html  
    grid.doublePerturbation                 html  
    grid.sgiHeatmap                         html  
    normalizeMainEffectQuery                html  
    normalizeMainEffectTemplate             html  
    normalizePlateEffect                    html  
    plotDoublePerturbation                  html  
    plotHeatmap                             html  
    reportAnnotation                        html  
    sgi                                     html  
    sgisubset                               html  
    sgisubsetQueryDesign                    html  
    startReport                             html  
    summarizeSamples                        html  
    swaptree                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (RNAinteract)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'PloGO2' is missing or broken
 done