Daniel Lai
| Snapshot Date: 2021-01-24 14:40:26 -0500 (Sun, 24 Jan 2021) |
| URL: https://git.bioconductor.org/packages/R4RNA |
| Branch: master |
| Last Commit: ba7bf7c |
| Last Changed Date: 2020-10-27 11:09:25 -0500 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-01-25 12:37:24 -0500 (Mon, 25 Jan 2021).
| TO THE DEVELOPERS/MAINTAINERS OF THE R4RNA PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1412/1938 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| R4RNA 1.19.0 Daniel Lai
| malbec2 | Linux (Ubuntu 20.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | OK | OK | OK | |||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: R4RNA |
| Version: 1.19.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.13/bioc/src/contrib/R4RNA_1.19.0.tar.gz && rm -rf R4RNA.buildbin-libdir && mkdir R4RNA.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=R4RNA.buildbin-libdir R4RNA_1.19.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL R4RNA_1.19.0.zip && rm R4RNA_1.19.0.tar.gz R4RNA_1.19.0.zip |
| StartedAt: 2021-01-24 17:42:57 -0500 (Sun, 24 Jan 2021) |
| EndedAt: 2021-01-24 17:44:11 -0500 (Sun, 24 Jan 2021) |
| EllapsedTime: 73.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.13/bioc/src/contrib/R4RNA_1.19.0.tar.gz && rm -rf R4RNA.buildbin-libdir && mkdir R4RNA.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=R4RNA.buildbin-libdir R4RNA_1.19.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL R4RNA_1.19.0.zip && rm R4RNA_1.19.0.tar.gz R4RNA_1.19.0.zip
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install for i386
* installing *source* package 'R4RNA' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'R4RNA'
finding HTML links ... done
R4RNA-package html
REDIRECT:topic R4RNA -> R4RNA-package.html [ SUCCESS ]
REDIRECT:topic R4RNA-package -> R4RNA-package.html [ SUCCESS ]
alignmentStatistics html
REDIRECT:topic baseConservation -> alignmentStatistics.html [ SUCCESS ]
REDIRECT:topic basepairCanonical -> alignmentStatistics.html [ SUCCESS ]
REDIRECT:topic basepairConservation -> alignmentStatistics.html [ SUCCESS ]
REDIRECT:topic basepairCovariation -> alignmentStatistics.html [ SUCCESS ]
REDIRECT:topic helixCanonical -> alignmentStatistics.html [ SUCCESS ]
REDIRECT:topic helixConservation -> alignmentStatistics.html [ SUCCESS ]
REDIRECT:topic helixCovariation -> alignmentStatistics.html [ SUCCESS ]
REDIRECT:topic alignmentConservation -> alignmentStatistics.html [ SUCCESS ]
REDIRECT:topic alignmentCovariation -> alignmentStatistics.html [ SUCCESS ]
REDIRECT:topic alignmentCanonical -> alignmentStatistics.html [ SUCCESS ]
REDIRECT:topic alignmentPercentGaps -> alignmentStatistics.html [ SUCCESS ]
REDIRECT:file alignmentStatistics.html -> alignmentStatistics.html [ SUCCESS ]
as.helix html
REDIRECT:topic as.helix -> as.helix.html [ SUCCESS ]
REDIRECT:topic is.helix -> as.helix.html [ SUCCESS ]
REDIRECT:topic parseBracket -> as.helix.html [ SUCCESS ]
basepairFrequency html
REDIRECT:topic basepairFrequency -> basepairFrequency.html [ SUCCESS ]
blankPlot html
REDIRECT:topic blankPlot -> blankPlot.html [ SUCCESS ]
REDIRECT:topic maxHeight -> blankPlot.html [ SUCCESS ]
colourHelices html
REDIRECT:topic colourByCount -> colourHelices.html [ SUCCESS ]
REDIRECT:topic colourByValue -> colourHelices.html [ SUCCESS ]
REDIRECT:topic colourByConservation -> colourHelices.html [ SUCCESS ]
REDIRECT:topic colourByCovariation -> colourHelices.html [ SUCCESS ]
REDIRECT:topic colourByCanonical -> colourHelices.html [ SUCCESS ]
REDIRECT:topic colourByBasepairFrequency -> colourHelices.html [ SUCCESS ]
REDIRECT:topic colourByUnknottedGroups -> colourHelices.html [ SUCCESS ]
REDIRECT:topic defaultPalette -> colourHelices.html [ SUCCESS ]
REDIRECT:file colourHelices.html -> colourHelices.html [ SUCCESS ]
expandCollapseHelix html
REDIRECT:topic expandHelix -> expandCollapseHelix.html [ SUCCESS ]
REDIRECT:topic collapseHelix -> expandCollapseHelix.html [ SUCCESS ]
REDIRECT:file expandCollapseHelix.html -> expandCollapseHelix.html [ SUCCESS ]
helix html
REDIRECT:topic helix -> helix.html [ SUCCESS ]
REDIRECT:topic fasta -> helix.html [ SUCCESS ]
REDIRECT:topic known -> helix.html [ SUCCESS ]
logicalHelix html
REDIRECT:topic isConflictingHelix -> logicalHelix.html [ SUCCESS ]
REDIRECT:topic isDuplicatingHelix -> logicalHelix.html [ SUCCESS ]
REDIRECT:topic isOverlappingHelix -> logicalHelix.html [ SUCCESS ]
REDIRECT:file logicalHelix.html -> logicalHelix.html [ SUCCESS ]
logseq html
REDIRECT:topic logseq -> logseq.html [ SUCCESS ]
REDIRECT:topic logfloor -> logseq.html [ SUCCESS ]
REDIRECT:topic logceiling -> logseq.html [ SUCCESS ]
plotCovariance html
REDIRECT:topic plotCovariance -> plotCovariance.html [ SUCCESS ]
REDIRECT:topic plotDoubleCovariance -> plotCovariance.html [ SUCCESS ]
REDIRECT:topic plotOverlapCovariance -> plotCovariance.html [ SUCCESS ]
plotHelix html
REDIRECT:topic plotHelix -> plotHelix.html [ SUCCESS ]
REDIRECT:topic plotDoubleHelix -> plotHelix.html [ SUCCESS ]
REDIRECT:topic plotOverlapHelix -> plotHelix.html [ SUCCESS ]
REDIRECT:topic plotArcs -> plotHelix.html [ SUCCESS ]
REDIRECT:topic plotArc -> plotHelix.html [ SUCCESS ]
readStructure html
REDIRECT:topic readHelix -> readStructure.html [ SUCCESS ]
REDIRECT:topic readConnect -> readStructure.html [ SUCCESS ]
REDIRECT:topic readVienna -> readStructure.html [ SUCCESS ]
REDIRECT:topic readBpseq -> readStructure.html [ SUCCESS ]
REDIRECT:file readStructure.html -> readStructure.html [ SUCCESS ]
structureMismatchScore html
REDIRECT:topic structureMismatchScore -> structureMismatchScore.html [ SUCCESS ]
unknottedGroups html
REDIRECT:topic unknottedGroups -> unknottedGroups.html [ SUCCESS ]
viennaToHelix html
REDIRECT:topic viennaToHelix -> viennaToHelix.html [ SUCCESS ]
REDIRECT:topic helixToVienna -> viennaToHelix.html [ SUCCESS ]
REDIRECT:topic helixToConnect -> viennaToHelix.html [ SUCCESS ]
REDIRECT:topic helixToBpseq -> viennaToHelix.html [ SUCCESS ]
writeHelix html
REDIRECT:topic writeHelix -> writeHelix.html [ SUCCESS ]
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'R4RNA' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'R4RNA' as R4RNA_1.19.0.zip
* DONE (R4RNA)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'R4RNA' successfully unpacked and MD5 sums checked