Back to Multiple platform build/check report for BioC 3.13
ABCDEFGHIJKLMNOPQ[R]STUVWXYZ

BUILD BIN report for R4RNA on tokay2

This page was generated on 2021-01-25 12:37:24 -0500 (Mon, 25 Jan 2021).

TO THE DEVELOPERS/MAINTAINERS OF THE R4RNA PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1412/1938HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
R4RNA 1.19.0
Daniel Lai
Snapshot Date: 2021-01-24 14:40:26 -0500 (Sun, 24 Jan 2021)
URL: https://git.bioconductor.org/packages/R4RNA
Branch: master
Last Commit: ba7bf7c
Last Changed Date: 2020-10-27 11:09:25 -0500 (Tue, 27 Oct 2020)
malbec2 Linux (Ubuntu 20.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
riesling1 Windows Server 2019 Standard / x64  OK  OK  OK  OK 
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: R4RNA
Version: 1.19.0
Command: rm -rf R4RNA.buildbin-libdir && mkdir R4RNA.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=R4RNA.buildbin-libdir R4RNA_1.19.0.tar.gz
StartedAt: 2021-01-25 12:05:09 -0500 (Mon, 25 Jan 2021)
EndedAt: 2021-01-25 12:06:07 -0500 (Mon, 25 Jan 2021)
EllapsedTime: 58.2 seconds
RetCode: 0
Status:  OK  
PackageFile: R4RNA_1.19.0.zip
PackageFileSize: 1022 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf R4RNA.buildbin-libdir && mkdir R4RNA.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=R4RNA.buildbin-libdir R4RNA_1.19.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'R4RNA' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'R4RNA'
    finding HTML links ... done
    R4RNA-package                           html  
REDIRECT:topic	 R4RNA -> R4RNA-package.html [ SUCCESS ]
REDIRECT:topic	 R4RNA-package -> R4RNA-package.html [ SUCCESS ]
    alignmentStatistics                     html  
REDIRECT:topic	 baseConservation -> alignmentStatistics.html [ SUCCESS ]
REDIRECT:topic	 basepairCanonical -> alignmentStatistics.html [ SUCCESS ]
REDIRECT:topic	 basepairConservation -> alignmentStatistics.html [ SUCCESS ]
REDIRECT:topic	 basepairCovariation -> alignmentStatistics.html [ SUCCESS ]
REDIRECT:topic	 helixCanonical -> alignmentStatistics.html [ SUCCESS ]
REDIRECT:topic	 helixConservation -> alignmentStatistics.html [ SUCCESS ]
REDIRECT:topic	 helixCovariation -> alignmentStatistics.html [ SUCCESS ]
REDIRECT:topic	 alignmentConservation -> alignmentStatistics.html [ SUCCESS ]
REDIRECT:topic	 alignmentCovariation -> alignmentStatistics.html [ SUCCESS ]
REDIRECT:topic	 alignmentCanonical -> alignmentStatistics.html [ SUCCESS ]
REDIRECT:topic	 alignmentPercentGaps -> alignmentStatistics.html [ SUCCESS ]
REDIRECT:file	 alignmentStatistics.html -> alignmentStatistics.html [ SUCCESS ]
    as.helix                                html  
REDIRECT:topic	 as.helix -> as.helix.html [ SUCCESS ]
REDIRECT:topic	 is.helix -> as.helix.html [ SUCCESS ]
REDIRECT:topic	 parseBracket -> as.helix.html [ SUCCESS ]
    basepairFrequency                       html  
REDIRECT:topic	 basepairFrequency -> basepairFrequency.html [ SUCCESS ]
    blankPlot                               html  
REDIRECT:topic	 blankPlot -> blankPlot.html [ SUCCESS ]
REDIRECT:topic	 maxHeight -> blankPlot.html [ SUCCESS ]
    colourHelices                           html  
REDIRECT:topic	 colourByCount -> colourHelices.html [ SUCCESS ]
REDIRECT:topic	 colourByValue -> colourHelices.html [ SUCCESS ]
REDIRECT:topic	 colourByConservation -> colourHelices.html [ SUCCESS ]
REDIRECT:topic	 colourByCovariation -> colourHelices.html [ SUCCESS ]
REDIRECT:topic	 colourByCanonical -> colourHelices.html [ SUCCESS ]
REDIRECT:topic	 colourByBasepairFrequency -> colourHelices.html [ SUCCESS ]
REDIRECT:topic	 colourByUnknottedGroups -> colourHelices.html [ SUCCESS ]
REDIRECT:topic	 defaultPalette -> colourHelices.html [ SUCCESS ]
REDIRECT:file	 colourHelices.html -> colourHelices.html [ SUCCESS ]
    expandCollapseHelix                     html  
REDIRECT:topic	 expandHelix -> expandCollapseHelix.html [ SUCCESS ]
REDIRECT:topic	 collapseHelix -> expandCollapseHelix.html [ SUCCESS ]
REDIRECT:file	 expandCollapseHelix.html -> expandCollapseHelix.html [ SUCCESS ]
    helix                                   html  
REDIRECT:topic	 helix -> helix.html [ SUCCESS ]
REDIRECT:topic	 fasta -> helix.html [ SUCCESS ]
REDIRECT:topic	 known -> helix.html [ SUCCESS ]
    logicalHelix                            html  
REDIRECT:topic	 isConflictingHelix -> logicalHelix.html [ SUCCESS ]
REDIRECT:topic	 isDuplicatingHelix -> logicalHelix.html [ SUCCESS ]
REDIRECT:topic	 isOverlappingHelix -> logicalHelix.html [ SUCCESS ]
REDIRECT:file	 logicalHelix.html -> logicalHelix.html [ SUCCESS ]
    logseq                                  html  
REDIRECT:topic	 logseq -> logseq.html [ SUCCESS ]
REDIRECT:topic	 logfloor -> logseq.html [ SUCCESS ]
REDIRECT:topic	 logceiling -> logseq.html [ SUCCESS ]
    plotCovariance                          html  
REDIRECT:topic	 plotCovariance -> plotCovariance.html [ SUCCESS ]
REDIRECT:topic	 plotDoubleCovariance -> plotCovariance.html [ SUCCESS ]
REDIRECT:topic	 plotOverlapCovariance -> plotCovariance.html [ SUCCESS ]
    plotHelix                               html  
REDIRECT:topic	 plotHelix -> plotHelix.html [ SUCCESS ]
REDIRECT:topic	 plotDoubleHelix -> plotHelix.html [ SUCCESS ]
REDIRECT:topic	 plotOverlapHelix -> plotHelix.html [ SUCCESS ]
REDIRECT:topic	 plotArcs -> plotHelix.html [ SUCCESS ]
REDIRECT:topic	 plotArc -> plotHelix.html [ SUCCESS ]
    readStructure                           html  
REDIRECT:topic	 readHelix -> readStructure.html [ SUCCESS ]
REDIRECT:topic	 readConnect -> readStructure.html [ SUCCESS ]
REDIRECT:topic	 readVienna -> readStructure.html [ SUCCESS ]
REDIRECT:topic	 readBpseq -> readStructure.html [ SUCCESS ]
REDIRECT:file	 readStructure.html -> readStructure.html [ SUCCESS ]
    structureMismatchScore                  html  
REDIRECT:topic	 structureMismatchScore -> structureMismatchScore.html [ SUCCESS ]
    unknottedGroups                         html  
REDIRECT:topic	 unknottedGroups -> unknottedGroups.html [ SUCCESS ]
    viennaToHelix                           html  
REDIRECT:topic	 viennaToHelix -> viennaToHelix.html [ SUCCESS ]
REDIRECT:topic	 helixToVienna -> viennaToHelix.html [ SUCCESS ]
REDIRECT:topic	 helixToConnect -> viennaToHelix.html [ SUCCESS ]
REDIRECT:topic	 helixToBpseq -> viennaToHelix.html [ SUCCESS ]
    writeHelix                              html  
REDIRECT:topic	 writeHelix -> writeHelix.html [ SUCCESS ]
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'R4RNA' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'R4RNA' as R4RNA_1.19.0.zip
* DONE (R4RNA)