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This page was generated on 2021-11-30 13:55:04 -0500 (Tue, 30 Nov 2021).

INSTALL results for PAA on riesling1

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raw results

Package 1348/2068HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
PAA 1.29.0  (landing page)
Michael Turewicz , Martin Eisenacher
Snapshot Date: 2021-11-29 14:50:17 -0500 (Mon, 29 Nov 2021)
git_url: https://git.bioconductor.org/packages/PAA
git_branch: master
git_last_commit: ed8ff09
git_last_commit_date: 2021-10-26 12:16:40 -0500 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: PAA
Version: 1.29.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.15/bioc/src/contrib/PAA_1.29.0.tar.gz && rm -rf PAA.buildbin-libdir && mkdir PAA.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PAA.buildbin-libdir PAA_1.29.0.tar.gz && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL PAA_1.29.0.zip && rm PAA_1.29.0.tar.gz PAA_1.29.0.zip
StartedAt: 2021-11-29 18:27:55 -0500 (Mon, 29 Nov 2021)
EndedAt: 2021-11-29 18:31:05 -0500 (Mon, 29 Nov 2021)
EllapsedTime: 189.9 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.15/bioc/src/contrib/PAA_1.29.0.tar.gz && rm -rf PAA.buildbin-libdir && mkdir PAA.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=PAA.buildbin-libdir PAA_1.29.0.tar.gz && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL PAA_1.29.0.zip && rm PAA_1.29.0.tar.gz PAA_1.29.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0 2986k    0 13525    0     0   115k      0  0:00:25 --:--:--  0:00:25  114k
100 2986k  100 2986k    0     0  3966k      0 --:--:-- --:--:-- --:--:-- 3961k
only one architecture so ignoring '--merge-multiarch'
* installing *source* package 'PAA' ...
** using staged installation
** libs
"C:/rtools40/mingw64/bin/"gcc  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG  -I'D:/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c PAA_init.c -o PAA_init.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG  -I'D:/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG  -I'D:/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c joinMCountResults.cpp -o joinMCountResults.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG  -I'D:/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c mCount.cpp -o mCount.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG  -I'D:/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c mMsMatrix.cpp -o mMsMatrix.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG  -I'D:/biocbuild/bbs-3.15-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c sampling.cpp -o sampling.o
C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o PAA.dll tmp.def PAA_init.o RcppExports.o joinMCountResults.o mCount.o mMsMatrix.o sampling.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LD:/biocbuild/bbs-3.15-bioc/R/bin/x64 -lR
installing to D:/biocbuild/bbs-3.15-bioc/meat/PAA.buildbin-libdir/00LOCK-PAA/00new/PAA/libs/x64
** R
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'PAA'
    finding HTML links ... done
    batchAdjust                             html  
    batchFilter                             html  
    batchFilter.anova                       html  
    diffAnalysis                            html  
    loadGPR                                 html  
    mMsMatrix                               html  
    normalizeArrays                         html  
    plotArray                               html  
    plotFeatures                            html  
    plotFeaturesHeatmap.2                   html  
    plotFeaturesHeatmap                     html  
    plotMAPlots                             html  
    plotNormMethods                         html  
    preselect                               html  
    printFeatures                           html  
    pvaluePlot                              html  
    selectFeatures                          html  
    shuffleData                             html  
    volcanoPlot                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'PAA' as PAA_1.29.0.zip
* DONE (PAA)
* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
package 'PAA' successfully unpacked and MD5 sums checked