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This page was generated on 2022-01-15 11:08:10 -0500 (Sat, 15 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4160
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4055
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2021-12-21 r81400 ucrt) -- "Unsuffered Consequences" 3997
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4114
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for NoRCE on riesling1


To the developers/maintainers of the NoRCE package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/NoRCE.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1294/2074HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
NoRCE 1.7.1  (landing page)
Gulden Olgun
Snapshot Date: 2022-01-14 13:55:18 -0500 (Fri, 14 Jan 2022)
git_url: https://git.bioconductor.org/packages/NoRCE
git_branch: master
git_last_commit: 59b0d7d
git_last_commit_date: 2021-11-21 00:38:54 -0500 (Sun, 21 Nov 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  NO, package depends on 'KEGGREST' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: NoRCE
Version: 1.7.1
Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL NoRCE
StartedAt: 2022-01-14 16:06:35 -0500 (Fri, 14 Jan 2022)
EndedAt: 2022-01-14 16:07:53 -0500 (Fri, 14 Jan 2022)
EllapsedTime: 78.1 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL NoRCE
###
##############################################################################
##############################################################################


* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'NoRCE' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'NoRCE'
    finding HTML links ... done
    KeggEnrichment                          html  
    NoRCE-class                             html  
    WikiEnrichment                          html  
    annGO                                   html  
    assembly                                html  
    brain_disorder_ncRNA                    html  
    brain_mirna                             html  
    breastmRNA                              html  
    calculateCorr                           html  
    convertGMT                              html  
    convertGeneID                           html  
    corrbased                               html  
    corrbasedMrna                           html  
    createNetwork                           html  
    drawDotPlot                             html  
    extractBiotype                          html  
    filterBiotype                           html  
    geneGOEnricher                          html  
    genePathwayEnricher                     html  
    geneRegionGOEnricher                    html  
    geneRegionPathwayEnricher               html  
    getGoDag                                html  
    getKeggDiagram                          html  
    getNearToExon                           html  
    getNearToIntron                         html  
    getReactomeDiagram                      html  
    getTADOverlap                           html  
    getUCSC                                 html  
    getmiRNACount                           html  
    goEnrichment                            html  
    listTAD                                 html  
    mirna                                   html  
    mirnaGOEnricher                         html  
    mirnaPathwayEnricher                    html  
    mirnaRegionGOEnricher                   html  
    mirnaRegionPathwayEnricher              html  
    mrna                                    html  
    ncRegion                                html  
    packageCheck                            html  
    pathwayEnrichment                       html  
    predictmiTargets                        html  
    reactomeEnrichment                      html  
    setParameters                           html  
    tad_dmel                                html  
    tad_hg19                                html  
    tad_hg38                                html  
    tad_mm10                                html  
    topEnrichment                           html  
    writeEnrichment                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (NoRCE)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'INSPEcT' is missing or broken
Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'VarCon' is missing or broken
 done