Claudio Isella
| Snapshot Date: 2022-06-23 14:00:04 -0400 (Thu, 23 Jun 2022) |
| git_url: https://git.bioconductor.org/packages/Mulcom |
| git_branch: master |
| git_last_commit: aed8c03 |
| git_last_commit_date: 2022-04-26 11:05:42 -0400 (Tue, 26 Apr 2022) |
| Back to Multiple platform build/check report for BioC 3.16 |
|
This page was generated on 2022-06-24 11:06:50 -0400 (Fri, 24 Jun 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.2.0 Patched (2022-06-02 r82447) -- "Vigorous Calisthenics" | 4331 |
| palomino4 | Windows Server 2022 Datacenter | x64 | 4.2.0 Patched (2022-06-02 r82447 ucrt) -- "Vigorous Calisthenics" | 4136 |
| lconway | macOS 12.2.1 Monterey | x86_64 | 4.2.0 Patched (2022-05-29 r82424) -- "Vigorous Calisthenics" | 4147 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the Mulcom package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Mulcom.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1257/2118 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| Mulcom 1.47.0 (landing page) Claudio Isella
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| palomino4 | Windows Server 2022 Datacenter / x64 | OK | OK | WARNINGS | OK | | ||||||||
| lconway | macOS 12.2.1 Monterey / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: Mulcom |
| Version: 1.47.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.16/bioc/src/contrib/Mulcom_1.47.0.tar.gz && rm -rf Mulcom.buildbin-libdir && mkdir Mulcom.buildbin-libdir && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Mulcom.buildbin-libdir Mulcom_1.47.0.tar.gz && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD INSTALL Mulcom_1.47.0.zip && rm Mulcom_1.47.0.tar.gz Mulcom_1.47.0.zip |
| StartedAt: 2022-06-23 15:44:56 -0400 (Thu, 23 Jun 2022) |
| EndedAt: 2022-06-23 15:45:13 -0400 (Thu, 23 Jun 2022) |
| EllapsedTime: 16.9 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.16/bioc/src/contrib/Mulcom_1.47.0.tar.gz && rm -rf Mulcom.buildbin-libdir && mkdir Mulcom.buildbin-libdir && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Mulcom.buildbin-libdir Mulcom_1.47.0.tar.gz && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD INSTALL Mulcom_1.47.0.zip && rm Mulcom_1.47.0.tar.gz Mulcom_1.47.0.zip
###
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 1119k 100 1119k 0 0 6927k 0 --:--:-- --:--:-- --:--:-- 6911k
only one architecture so ignoring '--merge-multiarch'
* installing *source* package 'Mulcom' ...
** using staged installation
** libs
g++ -std=gnu++11 -I"F:/biocbuild/bbs-3.16-bioc/R/include" -DNDEBUG -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c mulLibs.cc -o mulLibs.o
mulLibs.cc: In function 'void Single_SimulationC(double*, double*, double*, double*, double*, double*, int*, int*, int*, int*, int*)':
mulLibs.cc:708:17: warning: statement has no effect [-Wunused-value]
708 | current_cluster ;
| ^~~~~~~~~~~~~~~
mulLibs.cc: In function 'void Complete_SimulationC(double*, int*, double*, double*, int*, int*, int*, int*, int*)':
mulLibs.cc:1022:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long long unsigned int'} [-Wsign-compare]
1022 | for ( int i = 0 ; i < sss2.size() ; i++ ) {
| ~~^~~~~~~~~~~~~
mulLibs.cc:1023:46: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long long unsigned int'} [-Wsign-compare]
1023 | for ( int j = 0 ; j < harmonic_means.size() ; j++ ) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++11 -shared -s -static-libgcc -o Mulcom.dll tmp.def mulLibs.o -LC:/rtools42/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools42/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.16-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.16-bioc/meat/Mulcom.buildbin-libdir/00LOCK-Mulcom/00new/Mulcom/libs/x64
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'Mulcom' as Mulcom_1.47.0.zip
* DONE (Mulcom)
* installing to library 'F:/biocbuild/bbs-3.16-bioc/R/library'
package 'Mulcom' successfully unpacked and MD5 sums checked