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This page was generated on 2022-01-24 11:05:59 -0500 (Mon, 24 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4163
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4058
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2021-12-21 r81400 ucrt) -- "Unsuffered Consequences" 4000
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4117
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for MADSEQ on nebbiolo1


To the developers/maintainers of the MADSEQ package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MADSEQ.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1030/2075HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MADSEQ 1.21.1  (landing page)
Yu Kong
Snapshot Date: 2022-01-23 13:55:15 -0500 (Sun, 23 Jan 2022)
git_url: https://git.bioconductor.org/packages/MADSEQ
git_branch: master
git_last_commit: 209e573
git_last_commit_date: 2021-11-21 00:29:48 -0500 (Sun, 21 Nov 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  NO, package depends on 'BSgenome' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: MADSEQ
Version: 1.21.1
Command: /home/biocbuild/bbs-3.15-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data MADSEQ
StartedAt: 2022-01-23 16:44:44 -0500 (Sun, 23 Jan 2022)
EndedAt: 2022-01-23 16:45:46 -0500 (Sun, 23 Jan 2022)
EllapsedTime: 62.1 seconds
RetCode: 0
Status:   OK  
PackageFile: MADSEQ_1.21.1.tar.gz
PackageFileSize: 1.96 MiB

Command output

##############################################################################
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###
### Running command:
###
###   /home/biocbuild/bbs-3.15-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data MADSEQ
###
##############################################################################
##############################################################################


* checking for file ‘MADSEQ/DESCRIPTION’ ... OK
* preparing ‘MADSEQ’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
  NB: this package now depends on R (>= 3.5.0)
  WARNING: Added dependency on R >= 3.5.0 because serialized objects in
  serialize/load version 3 cannot be read in older versions of R.
  File(s) containing such objects:
    ‘MADSEQ/inst/AQP7/hg19_AQP7_gr.RDS’
    ‘MADSEQ/inst/AQP7/hg38_AQP7_gr.RDS’
    ‘MADSEQ/inst/AQP7/hs37d5_AQP7_gr.RDS’
    ‘MADSEQ/inst/HLA/hg19_HLA_gr.RDS’ ‘MADSEQ/inst/HLA/hg38_HLA_gr.RDS’
    ‘MADSEQ/inst/HLA/hs37d5_HLA_gr.RDS’ ‘MADSEQ/inst/gap/hg19_gap_gr.RDS’
    ‘MADSEQ/inst/gap/hg38_gap_gr.RDS’ ‘MADSEQ/inst/gap/hs37d5_gap_gr.RDS’
* building ‘MADSEQ_1.21.1.tar.gz’