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This page was generated on 2022-01-18 11:07:35 -0500 (Tue, 18 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4161
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4056
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2021-12-21 r81400 ucrt) -- "Unsuffered Consequences" 3998
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4115
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for IVAS on riesling1


To the developers/maintainers of the IVAS package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/IVAS.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 970/2074HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
IVAS 2.15.0  (landing page)
Seonggyun Han
Snapshot Date: 2022-01-17 13:55:17 -0500 (Mon, 17 Jan 2022)
git_url: https://git.bioconductor.org/packages/IVAS
git_branch: master
git_last_commit: 0187e23
git_last_commit_date: 2021-10-26 12:18:38 -0500 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    WARNINGS    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  NO, package depends on 'GenomicFeatures' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: IVAS
Version: 2.15.0
Command: rm -rf IVAS.buildbin-libdir && mkdir IVAS.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=IVAS.buildbin-libdir IVAS_2.15.0.tar.gz
StartedAt: 2022-01-17 21:04:33 -0500 (Mon, 17 Jan 2022)
EndedAt: 2022-01-17 21:05:30 -0500 (Mon, 17 Jan 2022)
EllapsedTime: 57.4 seconds
RetCode: 0
Status:   OK  
PackageFile: IVAS_2.15.0.zip
PackageFileSize: 688.1 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf IVAS.buildbin-libdir && mkdir IVAS.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=IVAS.buildbin-libdir IVAS_2.15.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'IVAS' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Note: next used in wrong context: no loop is visible 
** help
*** installing help indices
  converting help for package 'IVAS'
    finding HTML links ... done
    ASdb-class                              html  
    CalSigSNP                               html  
    IVAS-deprecated                         html  
    IVAS-package                            html  
    MsqtlFinder                             html  
    RatioFromFPKM                           html  
    Splicingfinder                          html  
    calSignificant                          html  
    chrseparate                             html  
    finding level-2 HTML links ... done

    findAlternative                         html  
    findOversnp                             html  
    sQTLsFinder                             html  
    sampleexp                               html  
    samplesnp                               html  
    samplesnplocus                          html  
    saveBplot                               html  
    sqtlfinder                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'IVAS' as IVAS_2.15.0.zip
* DONE (IVAS)