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This page was generated on 2022-01-21 11:07:49 -0500 (Fri, 21 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4163
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4058
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2021-12-21 r81400 ucrt) -- "Unsuffered Consequences" 4000
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4117
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for IONiseR on riesling1


To the developers/maintainers of the IONiseR package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/IONiseR.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 947/2075HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
IONiseR 2.19.0  (landing page)
Mike Smith
Snapshot Date: 2022-01-20 13:55:17 -0500 (Thu, 20 Jan 2022)
git_url: https://git.bioconductor.org/packages/IONiseR
git_branch: master
git_last_commit: 9413ec8
git_last_commit_date: 2021-10-26 12:21:10 -0500 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  NO, package depends on 'ShortRead' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: IONiseR
Version: 2.19.0
Command: rm -rf IONiseR.buildbin-libdir && mkdir IONiseR.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=IONiseR.buildbin-libdir IONiseR_2.19.0.tar.gz
StartedAt: 2022-01-20 20:59:52 -0500 (Thu, 20 Jan 2022)
EndedAt: 2022-01-20 21:01:08 -0500 (Thu, 20 Jan 2022)
EllapsedTime: 75.5 seconds
RetCode: 0
Status:   OK  
PackageFile: IONiseR_2.19.0.zip
PackageFileSize: 2.629 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf IONiseR.buildbin-libdir && mkdir IONiseR.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=IONiseR.buildbin-libdir IONiseR_2.19.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'IONiseR' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'IONiseR'
    finding HTML links ... done
    Fast5Summary-class                      html  
    IONiseR                                 html  
    baseCalled                              html  
    channelActivityPlot                     html  
    channelHeatmap                          html  
    eventData                               html  
    fast5toFastq                            html  
    fastq                                   html  
    fastq2D                                 html  
    fastqComplement                         html  
    fastqTemplate                           html  
    layoutPlot                              html  
    muxHeatmap                              html  
    plotActiveChannels                      html  
    plotBaseProductionRate                  html  
    plotCurrentByTime                       html  
    plotEventRate                           html  
    plotKmerFrequencyCorrelation            html  
    plotReadAccumulation                    html  
    plotReadCategoryCounts                  html  
    plotReadCategoryQuals                   html  
    plotReadTypeProduction                  html  
    readFast5Log                            html  
    readFast5Summary                        html  
    readInfo                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'IONiseR' as IONiseR_2.19.0.zip
* DONE (IONiseR)