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This page was generated on 2022-01-25 11:07:31 -0500 (Tue, 25 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4164
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4059
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2021-12-21 r81400 ucrt) -- "Unsuffered Consequences" 4001
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4118
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for INSPEcT on riesling1


To the developers/maintainers of the INSPEcT package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/INSPEcT.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 934/2075HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
INSPEcT 1.25.0  (landing page)
Stefano de Pretis
Snapshot Date: 2022-01-24 13:55:18 -0500 (Mon, 24 Jan 2022)
git_url: https://git.bioconductor.org/packages/INSPEcT
git_branch: master
git_last_commit: e99d196
git_last_commit_date: 2021-10-26 12:21:19 -0500 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  NO, package depends on 'Biobase' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: INSPEcT
Version: 1.25.0
Command: rm -rf INSPEcT.buildbin-libdir && mkdir INSPEcT.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=INSPEcT.buildbin-libdir INSPEcT_1.25.0.tar.gz
StartedAt: 2022-01-24 20:58:35 -0500 (Mon, 24 Jan 2022)
EndedAt: 2022-01-24 21:00:46 -0500 (Mon, 24 Jan 2022)
EllapsedTime: 130.2 seconds
RetCode: 0
Status:   OK  
PackageFile: INSPEcT_1.25.0.zip
PackageFileSize: 8.063 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf INSPEcT.buildbin-libdir && mkdir INSPEcT.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=INSPEcT.buildbin-libdir INSPEcT_1.25.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'INSPEcT' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'INSPEcT'
    finding HTML links ... done
    AIC-INSPEcT-method                      html  
    Extract                                 html  
    INSPEcT-class                           html  
    finding level-2 HTML links ... done

    INSPEcT-shinyApps                       html  
    INSPEcT                                 html  
    INSPEcT_diffsteady-class                html  
    INSPEcT_model-class                     html  
    INSPEcT_steadyNoNascent-class           html  
    PTratio                                 html  
    PTreg                                   html  
    allcounts                               html  
    calculateRatePvals                      html  
    chisqmodel                              html  
    chisqtest                               html  
    combine                                 html  
    compareSteady                           html  
    compareSteadyNoNascent                  html  
    computeConfidenceIntervals              html  
    convergence                             html  
    correlationPlot                         html  
    dim-INSPEcT-method                      html  
    featureNames-INSPEcT-method             html  
    featureWidths                           html  
    geneClass                               html  
    inHeatmap                               html  
    inspectFromBAM                          html  
    inspectFromPCR                          html  
    labeledSF                               html  
    libsizes                                html  
    logLik                                  html  
    makeModelRates                          html  
    makeOscillatorySimModel                 html  
    makeSimDataset                          html  
    makeSimModel                            html  
    mature                                  html  
    matureVar                               html  
    modelRates                              html  
    modelRatesNF                            html  
    modelSelection                          html  
    modelingParams                          html  
    nGenes                                  html  
    nTpts                                   html  
    newINSPEcT                              html  
    plotGene                                html  
    plotMA                                  html  
    plotPMgene                              html  
    plotPMtrend                             html  
    premature                               html  
    prematureVar                            html  
    processingDelay                         html  
    quantifyExpressionsFromBAMs             html  
    quantifyExpressionsFromBWs              html  
    quantifyExpressionsFromTrAbundance      html  
    quantifyExpressionsFromTrCounts         html  
    ratePvals                               html  
    ratesFirstGuess                         html  
    ratesFirstGuessVar                      html  
    removeModel                             html  
    rocCurve                                html  
    rocThresholds                           html  
    setConfidenceIntervals                  html  
    simData3rep_Nascent                     html  
    simData3rep_NoNascent                   html  
    simData4rep_Nascent                     html  
    simData4rep_NoNascent                   html  
    split                                   html  
    tpts                                    html  
    viewConfidenceIntervals                 html  
    viewModelRates                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'INSPEcT' as INSPEcT_1.25.0.zip
* DONE (INSPEcT)