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This page was generated on 2022-01-26 11:07:33 -0500 (Wed, 26 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4164
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4059
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2021-12-21 r81400 ucrt) -- "Unsuffered Consequences" 4001
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4118
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for EBcoexpress on riesling1


To the developers/maintainers of the EBcoexpress package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/EBcoexpress.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 558/2075HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
EBcoexpress 1.39.0  (landing page)
John A. Dawson
Snapshot Date: 2022-01-25 13:55:17 -0500 (Tue, 25 Jan 2022)
git_url: https://git.bioconductor.org/packages/EBcoexpress
git_branch: master
git_last_commit: df91098
git_last_commit_date: 2021-10-26 12:02:56 -0500 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    WARNINGS    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  NO, package depends on 'EBarrays' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: EBcoexpress
Version: 1.39.0
Command: rm -rf EBcoexpress.buildbin-libdir && mkdir EBcoexpress.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=EBcoexpress.buildbin-libdir EBcoexpress_1.39.0.tar.gz
StartedAt: 2022-01-25 20:55:30 -0500 (Tue, 25 Jan 2022)
EndedAt: 2022-01-25 20:56:35 -0500 (Tue, 25 Jan 2022)
EllapsedTime: 64.6 seconds
RetCode: 0
Status:   OK  
PackageFile: EBcoexpress_1.39.0.zip
PackageFileSize: 844.6 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf EBcoexpress.buildbin-libdir && mkdir EBcoexpress.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=EBcoexpress.buildbin-libdir EBcoexpress_1.39.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'EBcoexpress' ...
** using staged installation
** libs
"C:/rtools40/mingw64/bin/"gcc  -I"D:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -fno-reorder-blocks-and-partition  -c EBcoexpress.c -o EBcoexpress.o
EBcoexpress.c: In function 'bwmcCworker':
EBcoexpress.c:74:15: warning: suggest parentheses around comparison in operand of '|' [-Wparentheses]
       if(temp < -1 | temp > 1)
          ~~~~~^~~~
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o EBcoexpress.dll tmp.def EBcoexpress.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LD:/biocbuild/bbs-3.15-bioc/R/bin/x64 -lR
installing to D:/biocbuild/bbs-3.15-bioc/meat/EBcoexpress.buildbin-libdir/00LOCK-EBcoexpress/00new/EBcoexpress/libs/x64
** R
** data
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'EBcoexpress'
    finding HTML links ... done
    ebCoexpressMeta                         html  
    ebCoexpressSeries                       html  
    fiftyGenes                              html  
    initializeHP                            html  
    makeMyD                                 html  
    priorDiagnostic                         html  
    rankMyGenes                             html  
    showNetwork                             html  
    showPair                                html  
    utilities                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'EBcoexpress' as EBcoexpress_1.39.0.zip
* DONE (EBcoexpress)