Multiple platform build/check report for BioC 3.19 - INSTALL results for EBSeqHMM on lconway

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This page was generated on 2024-03-28 11:39:12 -0400 (Thu, 28 Mar 2024).

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 22.04.3 LTS)	x86_64	R Under development (unstable) (2024-03-18 r86148) -- "Unsuffered Consequences"	4708
palomino3	Windows Server 2022 Datacenter	x64	R Under development (unstable) (2024-03-16 r86144 ucrt) -- "Unsuffered Consequences"	4446
lconway	macOS 12.7.1 Monterey	x86_64	R Under development (unstable) (2024-03-18 r86148) -- "Unsuffered Consequences"	4471
kunpeng2	Linux (openEuler 22.03 LTS-SP1)	aarch64	R Under development (unstable) (2024-03-19 r86153) -- "Unsuffered Consequences"	4426
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

~~EBSeqHMM 1.37.1~~ (landing page)
Ning Leng

Snapshot Date: 2024-03-27 14:00:18 -0400 (Wed, 27 Mar 2024)

git_url: https://git.bioconductor.org/packages/EBSeqHMM

git_branch: devel

git_last_commit: 688d301

git_last_commit_date: 2024-02-29 12:11:41 -0400 (Thu, 29 Feb 2024)

nebbiolo1

Linux (Ubuntu 22.04.3 LTS) / x86_64

ERROR

skipped

palomino3

Windows Server 2022 Datacenter / x64

ERROR

skipped

lconway

macOS 12.7.1 Monterey / x86_64

ERROR

skipped

kunpeng2

Linux (openEuler 22.03 LTS-SP1) / aarch64

ERROR

skipped

INSTALL results for EBSeqHMM on lconway

To the developers/maintainers of the EBSeqHMM package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/EBSeqHMM.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: EBSeqHMM

Version: 1.37.1

Command: /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL EBSeqHMM

StartedAt: 2024-03-27 15:34:39 -0400 (Wed, 27 Mar 2024)

EndedAt: 2024-03-27 15:34:41 -0400 (Wed, 27 Mar 2024)

EllapsedTime: 1.4 seconds

RetCode: 1

Status: ERROR

Command output

##############################################################################
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###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL EBSeqHMM
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library’
* installing *source* package ‘EBSeqHMM’ ...
** using staged installation
** R
Error in .install_package_code_files(".", instdir) : 
files in '/Users/biocbuild/bbs-3.19-bioc/meat/EBSeqHMM/R' missing from 'Collate' field:
  zzz.R
ERROR: unable to collate and parse R files for package ‘EBSeqHMM’
* removing ‘/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/EBSeqHMM’