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This page was generated on 2022-01-26 11:07:32 -0500 (Wed, 26 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4164
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4059
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2021-12-21 r81400 ucrt) -- "Unsuffered Consequences" 4001
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4118
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for DMRcaller on riesling1


To the developers/maintainers of the DMRcaller package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/DMRcaller.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 526/2075HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DMRcaller 1.27.1  (landing page)
Nicolae Radu Zabet
Snapshot Date: 2022-01-25 13:55:17 -0500 (Tue, 25 Jan 2022)
git_url: https://git.bioconductor.org/packages/DMRcaller
git_branch: master
git_last_commit: b5efd8f
git_last_commit_date: 2021-11-17 09:00:23 -0500 (Wed, 17 Nov 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  NO, package depends on 'GenomicRanges' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: DMRcaller
Version: 1.27.1
Command: rm -rf DMRcaller.buildbin-libdir && mkdir DMRcaller.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=DMRcaller.buildbin-libdir DMRcaller_1.27.1.tar.gz
StartedAt: 2022-01-25 20:54:55 -0500 (Tue, 25 Jan 2022)
EndedAt: 2022-01-25 20:55:52 -0500 (Tue, 25 Jan 2022)
EllapsedTime: 57.5 seconds
RetCode: 0
Status:   OK  
PackageFile: DMRcaller_1.27.1.zip
PackageFileSize: 1.881 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf DMRcaller.buildbin-libdir && mkdir DMRcaller.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=DMRcaller.buildbin-libdir DMRcaller_1.27.1.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'DMRcaller' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'DMRcaller'
    finding HTML links ... done
    DMRcaller                               html  
    finding level-2 HTML links ... done

    DMRsNoiseFilterCG                       html  
    GEs                                     html  
    analyseReadsInsideRegionsForCondition   html  
    computeDMRs                             html  
    computeDMRsReplicates                   html  
    computeMethylationDataCoverage          html  
    computeMethylationDataSpatialCorrelation
                                            html  
    computeMethylationProfile               html  
    computeOverlapProfile                   html  
    extractGC                               html  
    filterDMRs                              html  
    getWholeChromosomes                     html  
    joinReplicates                          html  
    mergeDMRsIteratively                    html  
    methylationDataList                     html  
    plotLocalMethylationProfile             html  
    plotMethylationDataCoverage             html  
    plotMethylationDataSpatialCorrelation   html  
    plotMethylationProfile                  html  
    plotMethylationProfileFromData          html  
    plotOverlapProfile                      html  
    poolMethylationDatasets                 html  
    poolTwoMethylationDatasets              html  
    readBismark                             html  
    readBismarkPool                         html  
    saveBismark                             html  
    syntheticDataReplicates                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'DMRcaller' as DMRcaller_1.27.1.zip
* DONE (DMRcaller)