Back to Multiple platform build/check report for BioC 3.15
AB[C]DEFGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2022-01-26 11:07:15 -0500 (Wed, 26 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4164
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4059
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2021-12-21 r81400 ucrt) -- "Unsuffered Consequences" 4001
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4118
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for Category on riesling1


To the developers/maintainers of the Category package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Category.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 247/2075HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Category 2.61.0  (landing page)
Bioconductor Package Maintainer
Snapshot Date: 2022-01-25 13:55:17 -0500 (Tue, 25 Jan 2022)
git_url: https://git.bioconductor.org/packages/Category
git_branch: master
git_last_commit: e64ddb1
git_last_commit_date: 2021-10-26 11:48:11 -0500 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  NO, package depends on 'BiocGenerics' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: Category
Version: 2.61.0
Command: D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL Category
StartedAt: 2022-01-25 15:58:23 -0500 (Tue, 25 Jan 2022)
EndedAt: 2022-01-25 15:59:33 -0500 (Tue, 25 Jan 2022)
EllapsedTime: 69.4 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL Category
###
##############################################################################
##############################################################################


* installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'Category' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'Category'
    finding HTML links ... done
    Category-defunct                        html  
    ChrBandTree-class                       html  
    ChrMapHyperGParams-class                html  
    ChrMapHyperGResult-class                html  
    ChrMapLinearMParams-class               html  
    ChrMapLinearMResult-class               html  
    DatPkg-class                            html  
    GOHyperGParams-class                    html  
    GSEAGOHyperGParams                      html  
    HyperGParams-class                      html  
    HyperGResult-accessors                  html  
    HyperGResult-class                      html  
    HyperGResultBase-class                  html  
    KEGGHyperGParams-class                  html  
    LinearMParams-class                     html  
    LinearMResult-class                     html  
    LinearMResultBase-class                 html  
    MAPAmat                                 html  
    NewChrBandTree                          html  
    OBOHyperGParams-class                   html  
    applyByCategory                         html  
    cateGOryMatrix                          html  
    categoryToEntrezBuilder                 html  
    cb_contingency                          html  
    cb_parse_band_Hs                        html  
    cb_parse_band_Mm                        html  
    cb_test                                 html  
    effectSize                              html  
    exampleLevels                           html  
    findAMstats                             html  
    getPathNames                            html  
    gseattperm                              html  
    hyperGTest                              html  
    hyperg                                  html  
    linearMTest                             html  
    local_test_factory                      html  
    makeChrBandGraph                        html  
    makeEBcontr                             html  
    makeValidParams                         html  
    probes2MAP                              html  
    probes2Path                             html  
    tree_visitor                            html  
    ttperm                                  html  
    universeBuilder                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (Category)
Making 'packages.html' ...Warning in packageDescription(i, lib.loc = lib, fields = "Title", encoding = "UTF-8") :
  DESCRIPTION file of package 'HPAStainR' is missing or broken
 done