Back to Multiple platform build/check report for BioC 3.15
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This page was generated on 2022-01-26 11:07:22 -0500 (Wed, 26 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4164
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4059
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2021-12-21 r81400 ucrt) -- "Unsuffered Consequences" 4001
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4118
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for COCOA on riesling1


To the developers/maintainers of the COCOA package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/COCOA.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 362/2075HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
COCOA 2.9.1  (landing page)
John Lawson
Snapshot Date: 2022-01-25 13:55:17 -0500 (Tue, 25 Jan 2022)
git_url: https://git.bioconductor.org/packages/COCOA
git_branch: master
git_last_commit: 8d1d3ca
git_last_commit_date: 2021-11-19 00:54:37 -0500 (Fri, 19 Nov 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  NO, package depends on 'GenomicRanges' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: COCOA
Version: 2.9.1
Command: rm -rf COCOA.buildbin-libdir && mkdir COCOA.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=COCOA.buildbin-libdir COCOA_2.9.1.tar.gz
StartedAt: 2022-01-25 20:51:32 -0500 (Tue, 25 Jan 2022)
EndedAt: 2022-01-25 20:52:35 -0500 (Tue, 25 Jan 2022)
EllapsedTime: 62.9 seconds
RetCode: 0
Status:   OK  
PackageFile: COCOA_2.9.1.zip
PackageFileSize: 2.814 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf COCOA.buildbin-libdir && mkdir COCOA.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=COCOA.buildbin-libdir COCOA_2.9.1.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'COCOA' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'COCOA'
    finding HTML links ... done
    COCOA                                   html  
    aggregateSignal                         html  
    aggregateSignalGRList                   html  
    atf3_chr1                               html  
    brcaATACCoord1                          html  
    brcaATACData1                           html  
    brcaMCoord1                             html  
    brcaMetadata                            html  
    brcaMethylData1                         html  
    brcaPCScores                            html  
    brcaPCScores657                         html  
    convertToFromNullDist                   html  
    esr1_chr1                               html  
    gata3_chr1                              html  
    getGammaPVal                            html  
    getMetaRegionProfile                    html  
    getPermStat                             html  
    getTopRegions                           html  
    nrf1_chr1                               html  
    plotAnnoScoreDist                       html  
    regionQuantileByTargetVar               html  
    rsRankingIndex                          html  
    rsScoreHeatmap                          html  
    rsScores                                html  
    runCOCOA                                html  
    runCOCOAPerm                            html  
    signalAlongAxis                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'COCOA' as COCOA_2.9.1.zip
* DONE (COCOA)