Back to Multiple platform build/check report for BioC 3.15
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This page was generated on 2022-01-21 11:07:07 -0500 (Fri, 21 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4163
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4058
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2021-12-21 r81400 ucrt) -- "Unsuffered Consequences" 4000
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-01-05 r81451) -- "Unsuffered Consequences" 4117
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for CAFE on riesling1


To the developers/maintainers of the CAFE package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CAFE.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 231/2075HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CAFE 1.31.0  (landing page)
Sander Bollen
Snapshot Date: 2022-01-20 13:55:17 -0500 (Thu, 20 Jan 2022)
git_url: https://git.bioconductor.org/packages/CAFE
git_branch: master
git_last_commit: 24b7cec
git_last_commit_date: 2021-10-26 12:12:15 -0500 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    WARNINGS    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  NO, package depends on 'biovizBase' which is not available
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: CAFE
Version: 1.31.0
Command: rm -rf CAFE.buildbin-libdir && mkdir CAFE.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=CAFE.buildbin-libdir CAFE_1.31.0.tar.gz
StartedAt: 2022-01-20 20:43:43 -0500 (Thu, 20 Jan 2022)
EndedAt: 2022-01-20 20:45:07 -0500 (Thu, 20 Jan 2022)
EllapsedTime: 84.1 seconds
RetCode: 0
Status:   OK  
PackageFile: CAFE_1.31.0.zip
PackageFileSize: 4.703 MiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf CAFE.buildbin-libdir && mkdir CAFE.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=CAFE.buildbin-libdir CAFE_1.31.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'CAFE' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'CAFE'
    finding HTML links ... done
    CAFE-package                            html  
    CAFE                                    html  
    ProcessCels                             html  
    armStats                                html  
    bandStats                               html  
    chromosomeStats                         html  
    cliSubset                               html  
    discontPlot                             html  
    discontSmooth                           html  
    facetPlot                               html  
    fisher.method                           html  
    guiSubset                               html  
    rawPlot                                 html  
    slidPlot                                html  
    slidSmooth                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'CAFE' as CAFE_1.31.0.zip
* DONE (CAFE)