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This page was generated on 2022-06-24 11:06:07 -0400 (Fri, 24 Jun 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.2.0 Patched (2022-06-02 r82447) -- "Vigorous Calisthenics" 4331
palomino4Windows Server 2022 Datacenterx644.2.0 Patched (2022-06-02 r82447 ucrt) -- "Vigorous Calisthenics" 4136
lconwaymacOS 12.2.1 Montereyx86_644.2.0 Patched (2022-05-29 r82424) -- "Vigorous Calisthenics" 4147
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for BgeeDB on palomino4


To the developers/maintainers of the BgeeDB package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/BgeeDB.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 140/2118HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BgeeDB 2.23.1  (landing page)
Julien Wollbrett , Julien Roux , Andrea Komljenovic , Frederic Bastian
Snapshot Date: 2022-06-23 14:00:04 -0400 (Thu, 23 Jun 2022)
git_url: https://git.bioconductor.org/packages/BgeeDB
git_branch: master
git_last_commit: f52f54e
git_last_commit_date: 2022-06-23 10:34:36 -0400 (Thu, 23 Jun 2022)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  YES
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  YES
lconwaymacOS 12.2.1 Monterey / x86_64  OK    OK    OK    OK  YES

Summary

Package: BgeeDB
Version: 2.23.1
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.16/bioc/src/contrib/BgeeDB_2.23.1.tar.gz && rm -rf BgeeDB.buildbin-libdir && mkdir BgeeDB.buildbin-libdir && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BgeeDB.buildbin-libdir BgeeDB_2.23.1.tar.gz && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD INSTALL BgeeDB_2.23.1.zip && rm BgeeDB_2.23.1.tar.gz BgeeDB_2.23.1.zip
StartedAt: 2022-06-23 16:12:59 -0400 (Thu, 23 Jun 2022)
EndedAt: 2022-06-23 16:13:35 -0400 (Thu, 23 Jun 2022)
EllapsedTime: 36.3 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.16/bioc/src/contrib/BgeeDB_2.23.1.tar.gz && rm -rf BgeeDB.buildbin-libdir && mkdir BgeeDB.buildbin-libdir && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BgeeDB.buildbin-libdir BgeeDB_2.23.1.tar.gz && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD INSTALL BgeeDB_2.23.1.zip && rm BgeeDB_2.23.1.tar.gz BgeeDB_2.23.1.zip
###
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##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 74412  100 74412    0     0  1273k      0 --:--:-- --:--:-- --:--:-- 1297k
only one architecture so ignoring '--merge-multiarch'
* installing *source* package 'BgeeDB' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading

groupGOTerms: 	GOBPTerm, GOMFTerm, GOCCTerm environments built.
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location

groupGOTerms: 	GOBPTerm, GOMFTerm, GOCCTerm environments built.
** testing if installed package can be loaded from final location

groupGOTerms: 	GOBPTerm, GOMFTerm, GOCCTerm environments built.
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'BgeeDB' as BgeeDB_2.23.1.zip
* DONE (BgeeDB)
* installing to library 'F:/biocbuild/bbs-3.16-bioc/R/library'
package 'BgeeDB' successfully unpacked and MD5 sums checked