Sarah Sandmann
| Snapshot Date: 2021-01-24 14:40:26 -0500 (Sun, 24 Jan 2021) |
| URL: https://git.bioconductor.org/packages/BBCAnalyzer |
| Branch: master |
| Last Commit: 24a6c8d |
| Last Changed Date: 2020-10-27 11:07:22 -0500 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-01-25 12:35:10 -0500 (Mon, 25 Jan 2021).
| TO THE DEVELOPERS/MAINTAINERS OF THE BBCAnalyzer PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 127/1938 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| BBCAnalyzer 1.21.0 Sarah Sandmann
| malbec2 | Linux (Ubuntu 20.04.1 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | WARNINGS | OK | | ||||||
| riesling1 | Windows Server 2019 Standard / x64 | OK | OK | WARNINGS | OK | |||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |
| Package: BBCAnalyzer |
| Version: 1.21.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.13/bioc/src/contrib/BBCAnalyzer_1.21.0.tar.gz && rm -rf BBCAnalyzer.buildbin-libdir && mkdir BBCAnalyzer.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BBCAnalyzer.buildbin-libdir BBCAnalyzer_1.21.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL BBCAnalyzer_1.21.0.zip && rm BBCAnalyzer_1.21.0.tar.gz BBCAnalyzer_1.21.0.zip |
| StartedAt: 2021-01-24 19:50:56 -0500 (Sun, 24 Jan 2021) |
| EndedAt: 2021-01-24 19:52:39 -0500 (Sun, 24 Jan 2021) |
| EllapsedTime: 103.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.13/bioc/src/contrib/BBCAnalyzer_1.21.0.tar.gz && rm -rf BBCAnalyzer.buildbin-libdir && mkdir BBCAnalyzer.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BBCAnalyzer.buildbin-libdir BBCAnalyzer_1.21.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL BBCAnalyzer_1.21.0.zip && rm BBCAnalyzer_1.21.0.tar.gz BBCAnalyzer_1.21.0.zip
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install for i386
* installing *source* package 'BBCAnalyzer' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'grDevices::windows' by 'GenomicRanges::windows' when loading 'BBCAnalyzer'
** help
*** installing help indices
converting help for package 'BBCAnalyzer'
finding HTML links ... done
BBCAnalyzer-package html
REDIRECT:topic BBCAnalyzer -> BBCAnalyzer-package.html [ SUCCESS ]
REDIRECT:topic Bases By Cigar Analyzer -> BBCAnalyzer-package.html [ SUCCESS ]
REDIRECT:topic BasesByCigar Analyzer -> BBCAnalyzer-package.html [ SUCCESS ]
REDIRECT:topic BasesByCigarAnalyzer -> BBCAnalyzer-package.html [ SUCCESS ]
REDIRECT:topic Bases Coverage -> BBCAnalyzer-package.html [ SUCCESS ]
REDIRECT:topic Cigar Analysis -> BBCAnalyzer-package.html [ SUCCESS ]
REDIRECT:file BBCAnalyzer-package.html -> BBCAnalyzer-package.html [ SUCCESS ]
analyzeBases html
REDIRECT:topic analyzeBases -> analyzeBases.html [ SUCCESS ]
REDIRECT:topic analyze Bases -> analyzeBases.html [ SUCCESS ]
analyzeBasesPlotOnly html
REDIRECT:topic analyzeBasesPlotOnly -> analyzeBasesPlotOnly.html [ SUCCESS ]
REDIRECT:topic analyze Bases Plot Only -> analyzeBasesPlotOnly.html [ SUCCESS ]
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'grDevices::windows' by 'GenomicRanges::windows' when loading 'BBCAnalyzer'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'grDevices::windows' by 'GenomicRanges::windows' when loading 'BBCAnalyzer'
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'BBCAnalyzer' ...
** testing if installed package can be loaded
Warning: replacing previous import 'grDevices::windows' by 'GenomicRanges::windows' when loading 'BBCAnalyzer'
* MD5 sums
packaged installation of 'BBCAnalyzer' as BBCAnalyzer_1.21.0.zip
* DONE (BBCAnalyzer)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'BBCAnalyzer' successfully unpacked and MD5 sums checked