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This page was generated on 2022-06-24 11:07:29 -0400 (Fri, 24 Jun 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.2.0 Patched (2022-06-02 r82447) -- "Vigorous Calisthenics" 4331
palomino4Windows Server 2022 Datacenterx644.2.0 Patched (2022-06-02 r82447 ucrt) -- "Vigorous Calisthenics" 4136
lconwaymacOS 12.2.1 Montereyx86_644.2.0 Patched (2022-05-29 r82424) -- "Vigorous Calisthenics" 4147
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for ArrayExpressHTS on lconway


To the developers/maintainers of the ArrayExpressHTS package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ArrayExpressHTS.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 76/2118HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ArrayExpressHTS 1.47.0  (landing page)
Angela Goncalves , Andrew Tikhonov
Snapshot Date: 2022-06-23 14:00:04 -0400 (Thu, 23 Jun 2022)
git_url: https://git.bioconductor.org/packages/ArrayExpressHTS
git_branch: master
git_last_commit: 4f3ba88
git_last_commit_date: 2022-04-26 11:07:49 -0400 (Tue, 26 Apr 2022)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  ERROR    ERROR  skipped
palomino4Windows Server 2022 Datacenter / x64... NOT SUPPORTED ...
lconwaymacOS 12.2.1 Monterey / x86_64  ERROR    ERROR  skippedskipped

Summary

Package: ArrayExpressHTS
Version: 1.47.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL ArrayExpressHTS
StartedAt: 2022-06-23 15:32:32 -0400 (Thu, 23 Jun 2022)
EndedAt: 2022-06-23 15:32:34 -0400 (Thu, 23 Jun 2022)
EllapsedTime: 1.9 seconds
RetCode: 1
Status:   ERROR  

Command output

##############################################################################
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###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL ArrayExpressHTS
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/4.2/Resources/library’
* installing *source* package ‘ArrayExpressHTS’ ...
** using staged installation
** libs
clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_FILE_OFFSET_BITS=64 -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rhtslib/include' -I/usr/local/include   -fPIC  -Wall -g -O2  -c addXS.c -o addXS.o
addXS.c:42:5: error: implicit declaration of function 'Rprintf' is invalid in C99 [-Werror,-Wimplicit-function-declaration]
    Rprintf("What?\n");
    ^
1 error generated.
make: *** [addXS.o] Error 1
ERROR: compilation failed for package ‘ArrayExpressHTS’
* removing ‘/Library/Frameworks/R.framework/Versions/4.2/Resources/library/ArrayExpressHTS’