Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-01-25 12:38:20 -0500 (Mon, 25 Jan 2021).
TO THE DEVELOPERS/MAINTAINERS OF THE AgiMicroRna PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 39/1938 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
AgiMicroRna 2.41.0 Pedro Lopez-Romero
| malbec2 | Linux (Ubuntu 20.04.1 LTS) / x86_64 | OK | OK | OK | ![]() | ||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | ![]() | ||||||
riesling1 | Windows Server 2019 Standard / x64 | [ OK ] | OK | WARNINGS | OK | |||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | ![]() |
Package: AgiMicroRna |
Version: 2.41.0 |
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/bioc/src/contrib/AgiMicroRna_2.41.0.tar.gz && rm -rf AgiMicroRna.buildbin-libdir && mkdir AgiMicroRna.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=AgiMicroRna.buildbin-libdir AgiMicroRna_2.41.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL AgiMicroRna_2.41.0.zip && rm AgiMicroRna_2.41.0.tar.gz AgiMicroRna_2.41.0.zip |
StartedAt: 2021-01-24 17:26:12 -0500 (Sun, 24 Jan 2021) |
EndedAt: 2021-01-24 17:27:14 -0500 (Sun, 24 Jan 2021) |
EllapsedTime: 62.5 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.13/bioc/src/contrib/AgiMicroRna_2.41.0.tar.gz && rm -rf AgiMicroRna.buildbin-libdir && mkdir AgiMicroRna.buildbin-libdir && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=AgiMicroRna.buildbin-libdir AgiMicroRna_2.41.0.tar.gz && D:\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL AgiMicroRna_2.41.0.zip && rm AgiMicroRna_2.41.0.tar.gz AgiMicroRna_2.41.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 26 1337k 26 356k 0 0 7915k 0 --:--:-- --:--:-- --:--:-- 7743k 100 1337k 100 1337k 0 0 23.3M 0 --:--:-- --:--:-- --:--:-- 22.9M install for i386 * installing *source* package 'AgiMicroRna' ... ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'AgiMicroRna' finding HTML links ... done HeatMapMicroRna html REDIRECT:topic HeatMapMicroRna -> HeatMapMicroRna.html [ SUCCESS ] PCAplotMicroRna html REDIRECT:topic PCAplotMicroRna -> PCAplotMicroRna.html [ SUCCESS ] RleMicroRna html REDIRECT:topic RleMicroRna -> RleMicroRna.html [ SUCCESS ] basicLimma html REDIRECT:topic basicLimma -> basicLimma.html [ SUCCESS ] boxplotMicroRna html REDIRECT:topic boxplotMicroRna -> boxplotMicroRna.html [ SUCCESS ] cvArray html REDIRECT:topic cvArray -> cvArray.html [ SUCCESS ] dd.micro html REDIRECT:topic dd.micro -> dd.micro.html [ SUCCESS ] ddPROC html REDIRECT:topic ddPROC -> ddPROC.html [ SUCCESS ] dim.uRNAList html REDIRECT:topic dim.uRNAList -> dim.uRNAList.html [ SUCCESS ] REDIRECT:topic length.uRNAList -> dim.uRNAList.html [ SUCCESS ] dimnames.uRNAList html REDIRECT:topic dimnames.uRNAList -> dimnames.uRNAList.html [ SUCCESS ] REDIRECT:topic dimnames<-.uRNAList -> dimnames.uRNAList.html [ FAIL ] Rd warning: cannot open file 'D:/biocbuild/bbs-3.13-bioc/meat/AgiMicroRna.buildbin-libdir/00LOCK-AgiMicroRna/00new/AgiMicroRna/help/dimnames<-.uRNAList.html': Invalid argument esetMicroRna html REDIRECT:topic esetMicroRna -> esetMicroRna.html [ SUCCESS ] filterMicroRna html REDIRECT:topic filterMicroRna -> filterMicroRna.html [ SUCCESS ] getDecideTests html REDIRECT:topic getDecideTests -> getDecideTests.html [ SUCCESS ] hierclusMicroRna html REDIRECT:topic hierclusMicroRna -> hierclusMicroRna.html [ SUCCESS ] mvaBASIC html REDIRECT:topic mvaBASIC -> mvaBASIC.html [ SUCCESS ] mvaMicroRna html REDIRECT:topic mvaMicroRna -> mvaMicroRna.html [ SUCCESS ] plotDensityMicroRna html REDIRECT:topic plotDensityMicroRna -> plotDensityMicroRna.html [ SUCCESS ] pvalHistogram html REDIRECT:topic pvalHistogram -> pvalHistogram.html [ SUCCESS ] qcPlots html REDIRECT:topic qcPlots -> qcPlots.html [ SUCCESS ] readMicroRnaAFE html REDIRECT:topic readMicroRnaAFE -> readMicroRnaAFE.html [ SUCCESS ] readTargets html REDIRECT:topic readTargets -> readTargets.html [ SUCCESS ] rmaMicroRna html REDIRECT:topic rmaMicroRna -> rmaMicroRna.html [ SUCCESS ] significantMicroRna html REDIRECT:topic significantMicroRna -> significantMicroRna.html [ SUCCESS ] summary.uRNAList html REDIRECT:topic summary.uRNAList -> summary.uRNAList.html [ SUCCESS ] targets.micro html REDIRECT:topic targets.micro -> targets.micro.html [ SUCCESS ] tgsMicroRna html REDIRECT:topic tgsMicroRna -> tgsMicroRna.html [ SUCCESS ] tgsNormalization html REDIRECT:topic tgsNormalization -> tgsNormalization.html [ SUCCESS ] uRNAList html REDIRECT:topic uRNAList-class -> uRNAList.html [ SUCCESS ] REDIRECT:topic show,uRNAList-method -> uRNAList.html [ SUCCESS ] REDIRECT:file uRNAList.html -> uRNAList.html [ SUCCESS ] writeEset html REDIRECT:topic writeEset -> writeEset.html [ SUCCESS ] ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'AgiMicroRna' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'AgiMicroRna' as AgiMicroRna_2.41.0.zip * DONE (AgiMicroRna) * installing to library 'D:/biocbuild/bbs-3.13-bioc/R/library' package 'AgiMicroRna' successfully unpacked and MD5 sums checked