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BUILD report for cogena on tokay2

This page was generated on 2019-10-16 12:33:01 -0400 (Wed, 16 Oct 2019).

Package 321/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
cogena 1.18.0
Zhilong Jia
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/cogena
Branch: RELEASE_3_9
Last Commit: 48ec1fa
Last Changed Date: 2019-05-02 11:53:54 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  WARNINGS UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK [ OK ] WARNINGS  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  WARNINGS  OK UNNEEDED, same version exists in internal repository

Summary

Package: cogena
Version: 1.18.0
Command: chmod a+r cogena -R && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data cogena
StartedAt: 2019-10-15 23:23:32 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 23:26:06 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 154.1 seconds
RetCode: 0
Status:  OK  
PackageFile: cogena_1.18.0.tar.gz
PackageFileSize: 5.198 MiB

Command output

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###
### Running command:
###
###   chmod a+r cogena -R && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data cogena
###
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* checking for file 'cogena/DESCRIPTION' ... OK
* preparing 'cogena':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* looking to see if a 'data/datalist' file should be added
  NB: this package now depends on R (>= 3.5.0)
  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/PD_data_04425e7acd7ecba12633391e75597e49.RData'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/PD_data_04425e7acd7ecba12633391e75597e49.rdx'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/cogena_e3691898da0b7a08b1e8292181eb3ea0.RData'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/cogena_e3691898da0b7a08b1e8292181eb3ea0.rdx'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/cogena_result_analysis_b084a4741a24b1f7572803141c811344.RData'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/cogena_result_analysis_b084a4741a24b1f7572803141c811344.rdx'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/corInCluster_7a7ad0731f513abc63af3f0d3150e0c0.RData'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/corInCluster_7a7ad0731f513abc63af3f0d3150e0c0.rdx'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/drp_7fe7a44a52398f5d38fa00f88e5bbb16.RData'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/drp_7fe7a44a52398f5d38fa00f88e5bbb16.rdx'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/drp_figure2_4dac03005e1e1f52ad709811a9e26e49.RData'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/drp_figure2_4dac03005e1e1f52ad709811a9e26e49.rdx'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/drp_figure_1ae6b86a547bb2e4ed0a759fe629053c.RData'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/drp_figure_1ae6b86a547bb2e4ed0a759fe629053c.rdx'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/enrichment_12f4dcedf3288c10dcad4baaa37eee9c.RData'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/enrichment_12f4dcedf3288c10dcad4baaa37eee9c.rdx'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/geneExpInCluster_72f497a5cd8b3897d70e4a3fde3ae032.RData'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/geneExpInCluster_72f497a5cd8b3897d70e4a3fde3ae032.rdx'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/geneInCluster_7d5a32cedf3a9d7c41842fac02a4cf44.RData'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/geneInCluster_7d5a32cedf3a9d7c41842fac02a4cf44.rdx'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/gene_list_annotation_698bb76ee5d979a2472cb827b050ca66.RData'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/gene_list_annotation_698bb76ee5d979a2472cb827b050ca66.rdx'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/heatmapCluster_7115ce6355bc1d10ccc9e611377047e5.RData'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/heatmapCluster_7115ce6355bc1d10ccc9e611377047e5.rdx'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/heatmapPEI_B_88984fa515837485b76774e548711637.RData'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/heatmapPEI_B_88984fa515837485b76774e548711637.rdx'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/heatmapPEI_a98878e50eeaa30cbb6c16005a51bdc6.RData'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/heatmapPEI_a98878e50eeaa30cbb6c16005a51bdc6.rdx'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/import_data_80915f8c6477d47a93fcc956f358a2ee.RData'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/import_data_80915f8c6477d47a93fcc956f358a2ee.rdx'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/sessionInfo_4c02acde1961c763dca8746bc76f9e87.RData'  WARNING: Added dependency on R >= 3.5.0 because serialized objects in  serialize/load version 3 cannot be read in older versions of R.  File(s) containing such objects:  'tmp/sessionInfo_4c02acde1961c763dca8746bc76f9e87.rdx'
* building 'cogena_1.18.0.tar.gz'